RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ZXDAP98168 799 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 GLO1Q04760 184 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 KDM4DQ6B0I6 523 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 WBP2NLQ6ICG8 309 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 PODNL1Q6PEZ8 512 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 MKXQ8IYA7 352 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 TEX29Q8N6K0 151 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 CCDC74BQ96LY2 380 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 EGLN3Q9H6Z9 239 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 PSORS1C1Q9UIG5 152 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 SDK1Q7Z5N4 2213 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 TRIM64CA6NLI5 447 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 IL7P13232 177 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 JUNBP17275 347 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 GABRA2P47869 451 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 PPIAP62937 165 aaKnown RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 TFF2Q03403 129 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 TBCEQ15813 527 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 PIP5KL1Q5T9C9 394 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 PRAMEF20Q5VT98 475 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 TMEM200AQ86VY9 491 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 C1orf87Q8N0U7 546 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 PIAS4Q8N2W9 510 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 CYB561A3Q8NBI2 242 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 OR13C3Q8NGS6 347 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 C11orf40Q8WZ69 217 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 DPAGT1Q9H3H5 408 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 CALHM2Q9HA72 323 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 B3GAT1Q9P2W7 334 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 DHCR7Q9UBM7 475 aaKnown RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 CLEC2DQ9UHP7 191 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 COL11A1P12107 1806 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 LRRC37AA6NMS7 1700 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 C5orf51A6NDU8 294 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 ANTXRLA6NF34 631 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 I3L521 148 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 NDUFB2O95178 105 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 TBC1D28Q2M2D7 210 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 TMEM176BQ3YBM2 270 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 PLEKHN1Q494U1 663 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 LRRN1Q6UXK5 716 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 SLC25A43Q8WUT9 341 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 SAMD8Q96LT4 415 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 BCL7BQ9BQE9 202 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 NDUFAF4Q9P032 175 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 MBD1Q9UIS9 605 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 DSCR3O14972 297 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 YY2O15391 372 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 SELEP16581 610 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 HIST1H1TP22492 207 aaPredicted RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 LIMS2Q7Z4I7 341 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 OR8J2Q8NGG1 315 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 KIR3DX1Q9H7L2 352 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 SIAEQ9HAT2 523 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 INIPQ9NRY2 104 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF701Q9NV72 531 aaPredicted RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 STOML2Q9UJZ1 356 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 GREB1LQ9C091 1923 aaPredicted RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 CLDN24A6NM45 220 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 HMGN2P05204 90 aaKnown RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 HTR2BP41595 481 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 FRKP42685 505 aaPredicted RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 CNIH2Q6PI25 160 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF704Q6ZNC4 412 aaPredicted RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 RBM45Q8IUH3 476 aaKnown RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 SLC37A2Q8TED4 501 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 APOBEC4Q8WW27 367 aaKnown RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 RFT1Q96AA3 541 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 MVB12AQ96EY5 273 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 CNN2Q99439 309 aaKnown RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 PKMYT1Q99640 499 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 DPH1Q9BZG8 443 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 OR2B2Q9GZK3 357 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 PLATP00750 562 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 IGLV3-27P01718 113 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 GKN3PP0CG01 181 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 L3MBTL4Q8NA19 623 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 UBTD2Q8WUN7 234 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 ITPKCQ96DU7 683 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 LCORQ96JN0 433 aaPredicted RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 FUZQ9BT04 418 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 CCDC32Q9BV29 185 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 ABCG5Q9H222 651 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 LRFN1Q9P244 771 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 PCDHGA3Q9Y5H0 932 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 LOC100509620A0A075B734 347 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 A0A0G2JMP0 313 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 STOMP27105 288 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 RBMXP38159 391 aaKnown RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 MAGEA2P43356 314 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 IHHQ14623 411 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 GPR19Q15760 415 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 CPOQ8IVL8 374 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 FBXL14Q8N1E6 418 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 OR4M2Q8NGB6 313 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 OR4F15Q8NGB8 312 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 OR4N2Q8NGD1 307 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 FGF14Q92915 247 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 HRASLS5Q96KN8 279 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms