RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CHST14Q8NCH0 376 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 OR13C2Q8NGS9 318 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 DNAJA3Q96EY1 480 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 ZNF578Q96N58 590 aaPredicted RBP16.85■□□□□ 0.29
SMC4-201ENST00000344722 LKAAEAR1Q8TD35 194 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 TANKQ92844 425 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 SCLYQ96I15 445 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 LIN7BQ9HAP6 207 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 NOX4Q9NPH5 578 aa16.85■□□□□ 0.29
SMC4-201ENST00000344722 TMEM225BP0DP42 221 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 AKR1C2P52895 323 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 OR10R2Q8NGX6 335 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 CPNE7Q9UBL6 633 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 PPT2Q9UMR5 302 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 ZNF175Q9Y473 711 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 CROCCQ5TZA2 2017 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 KDM4FA0A1W2PPD8 638 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 MEIS3P2A8K0S8 358 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 RGS11O94810 467 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 TAS2R46P59540 309 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 EBPQ15125 230 aaKnown RBP16.84■□□□□ 0.29
SMC4-201ENST00000344722 CPEB1Q9BZB8 566 aaKnown RBP16.84■□□□□ 0.29
SMC4-201ENST00000344722 ACKR4Q9NPB9 350 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 ELAVL3Q14576 367 aaKnown RBP16.84■□□□□ 0.29
SMC4-201ENST00000344722 SOHLH1Q5JUK2 328 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 OR56B2PQ8NGI1 322 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 YIPF5Q969M3 257 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 OR2A14Q96R47 310 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 STEAP1Q9UHE8 339 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 TJP1Q07157 1748 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 PLCH1Q4KWH8 1693 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 CA12O43570 354 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 GAB1Q13480 694 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 GPR18Q14330 331 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 TANGO2Q6ICL3 276 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 NIPAL3Q6P499 406 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 KCNIP4Q6PIL6 250 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 ZC3H14Q6PJT7 736 aaKnown RBP16.84■□□□□ 0.29
SMC4-201ENST00000344722 ISG20Q96AZ6 181 aaKnown RBP16.84■□□□□ 0.29
SMC4-201ENST00000344722 NMNAT2Q9BZQ4 307 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 TNFRSF12AQ9NP84 129 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 PLEKHJ1Q9NW61 149 aa16.84■□□□□ 0.29
SMC4-201ENST00000344722 SURF4O15260 269 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 UBL4AP11441 157 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 MMP11P24347 488 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 SLC6A8P48029 635 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 CDH26Q8IXH8 852 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 LSMEM1Q8N8F7 131 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 CHTF18Q8WVB6 975 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 LMF2Q9BU23 707 aaKnown RBP16.83■□□□□ 0.29
SMC4-201ENST00000344722 CXorf36Q9H7Y0 433 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 NR0B1P51843 470 aaKnown RBP16.83■□□□□ 0.29
SMC4-201ENST00000344722 RAB4BP61018 213 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 HYAL4Q2M3T9 481 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 CARD17Q5XLA6 110 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 OR4K15Q8NH41 348 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.83■□□□□ 0.29
SMC4-201ENST00000344722 POLMQ9NP87 494 aaPredicted RBP16.83■□□□□ 0.29
SMC4-201ENST00000344722 MOKQ9UQ07 419 aa16.83■□□□□ 0.29
SMC4-201ENST00000344722 TARM1B6A8C7 271 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 SCGB1D1O95968 90 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 SRMP19623 302 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 PDSS1Q5T2R2 415 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 SLC16A12Q6ZSM3 486 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 PRSS45Q7RTY3 260 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 CMTM1Q8IZ96 169 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 TMEM121BQ9BXQ6 578 aaPredicted RBP16.83■□□□□ 0.28
SMC4-201ENST00000344722 C1orf123Q9NWV4 160 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 NPIPA2E9PIF3 369 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 NPIPA3F8WFD2 350 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 SMAD6O43541 496 aaKnown RBP16.83■□□□□ 0.28
SMC4-201ENST00000344722 PRLHRP49683 370 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 C2orf27AQ580R0 203 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 GPR139Q6DWJ6 353 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 POC1BQ8TC44 478 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 NPIPA5A0A0B4J1W7 369 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 NPIPA7E9PJI5 369 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 NPIPA8P0DM63 369 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 TYRP1P17643 537 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 HTR2CP28335 458 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 FOXK2Q01167 660 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 SPOCK1Q08629 439 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 OR1S1Q8NH92 325 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 NICN1Q9BSH3 213 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 TGIF2Q9GZN2 237 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 CWH43Q9H720 699 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 SLC23A1Q9UHI7 598 aa16.83■□□□□ 0.28
SMC4-201ENST00000344722 ARRDC5A6NEK1 342 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 SGK494L7N484 410 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 CBR1P16152 277 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 RPL23AP62750 156 aaKnown RBP16.82■□□□□ 0.28
SMC4-201ENST00000344722 SNTB1Q13884 538 aaKnown RBP16.82■□□□□ 0.28
SMC4-201ENST00000344722 KIAA0141Q14154 515 aaPredicted RBP16.82■□□□□ 0.28
SMC4-201ENST00000344722 RNF212Q495C1 297 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 HSD11B1LQ7Z5J1 315 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 DAZLQ92904 295 aaKnown RBP16.82■□□□□ 0.28
SMC4-201ENST00000344722 MUTYHQ9UIF7 546 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 A0A1B0GUH1 482 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 NFKBIEO00221 500 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 HTR3BO95264 441 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms