RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SLAIN1Q8ND83 568 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 CDS1Q92903 461 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 AMDHD1Q96NU7 426 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 IL17FQ96PD4 163 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 WDR76Q9H967 626 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ICKQ9UPZ9 632 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LATO43561 262 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 GAAP10253 952 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TEAD1P28347 426 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 AFF3P51826 1226 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 NOGQ13253 232 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 FAM122BQ7Z309 247 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 CD163Q86VB7 1156 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LAS2Q8IYD9 372 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SMIM19Q96E16 107 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SSX3Q99909 188 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 IFT22Q9H7X7 185 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SLC6A14Q9UN76 642 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 CHST2Q9Y4C5 530 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 COL11A2P13942 1736 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TRAV27A0A087WT01 109 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PLPP1O14494 284 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PLPP2O43688 288 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 NKAIN3Q8N8D7 197 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 INTS14Q96SY0 518 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TRAF4Q9BUZ4 470 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 QRSL1Q9H0R6 528 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TAF9BQ9HBM6 251 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PRSS16Q9NQE7 514 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 CCDC88CQ9P219 2028 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 UPK1AO00322 258 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SYT7O43581 403 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 AQP8O94778 261 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SLC10A3P09131 477 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ANXA7P20073 488 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 HCCSP53701 268 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF709Q8N972 641 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TM4SF18Q96CE8 201 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 DTD2Q96FN9 168 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 BMFQ96LC9 184 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 HCAR1Q9BXC0 346 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 MAN2C1Q9NTJ4 1040 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LRFN1Q9P244 771 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TRBV23OR9-2A0A075B6M9 112 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 OR5H14A6NHG9 310 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TRIM64BA6NI03 449 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 NKG7Q16617 165 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ANKRD34AQ69YU3 496 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LIPIQ6XZB0 460 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 BPHLQ86WA6 291 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 BPIFB2Q8N4F0 458 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 OR5T3Q8NGG3 340 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM106AQ96A25 262 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SORBS1Q9BX66 1292 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SEMA4CQ9C0C4 833 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 A0A0U1RQS6 177 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LINC00862A6NCI5 91 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 MEIS3P1A6NDR6 274 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 E9PI62 339 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 EIF4EP06730 217 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ARHGAP40Q5TG30 622 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 RNLSQ5VYX0 342 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SULF2Q8IWU5 870 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM255BQ8WV15 326 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PMM1Q92871 262 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 MSLNLQ96KJ4 702 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 OR14A2Q96R54 314 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 MCOLN1Q9GZU1 580 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PRTFDC1Q9NRG1 225 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 GFOD1Q9NXC2 390 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF629Q9UEG4 869 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 RNF215Q9Y6U7 377 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ZSWIM8A7E2V4 1837 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 KDM4FA0A1W2PPD8 638 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF850A8MQ14 1090 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 GLP1RP43220 463 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 NR0B1P51843 470 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LUMP51884 338 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PRSS36Q5K4E3 855 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 MS4A8Q9BY19 250 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 RNF208Q9H0X6 261 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 KDM4EB2RXH2 506 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 H3BQ06 376 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 FGF18O76093 207 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 IFNA5P01569 189 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SLC2A5P22732 501 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 GRPRP30550 384 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SLC6A11P48066 632 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TAS2R46P59540 309 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SSBP1Q04837 148 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SNTB1Q13884 538 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 MLC1Q15049 377 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SSX1Q16384 188 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ARHGAP11BQ3KRB8 267 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 FTSJ1Q9UET6 329 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 HSPB2A8KAH6 182 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 FRS3O43559 492 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 NUDT21O43809 227 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 IGHA2P01877 340 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms