RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ETV7Q9Y603 341 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 DENND4AQ7Z401 1863 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 TBC1D3EA0A087X179 549 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 TMEM272A0A1B0GTI8 110 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 A0A1W2PS29 197 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 RFPL4AA6NLU0 287 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 CHURC1-FNTBB4DL54 471 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 RFPL4AL1F8VTS6 287 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 FMO6PO60774 539 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 CTNSO60931 367 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF254O75437 659 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 SELPP16109 830 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 ART1P52961 327 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 TAS2R20P59543 309 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 MC2RQ01718 297 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 SCRN3Q0VDG4 424 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 DUSP8Q13202 625 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 TCTN1Q2MV58 587 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 C9orf64Q5T6V5 341 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 HES5Q5TA89 166 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 DCAF12L2Q5VW00 463 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 TMEM215Q68D42 235 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 UQCC3Q6UW78 93 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 TMCO2Q7Z6W1 182 aaPredicted RBP8.9□□□□□ -0.98
HOXA1-201ENST00000343060 RANBP3LQ86VV4 465 aaPredicted RBP8.9□□□□□ -0.98
HOXA1-201ENST00000343060 OR13C2Q8NGS9 318 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 HMGB4Q8WW32 186 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 MIB2Q96AX9 1013 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 TCEAL4Q96EI5 215 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 S100A16Q96FQ6 103 aaKnown RBP8.9□□□□□ -0.98
HOXA1-201ENST00000343060 NRTNQ99748 197 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 PBX4Q9BYU1 374 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 SLC19A3Q9BZV2 496 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 SEMA4CQ9C0C4 833 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 MFFQ9GZY8 342 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 ACTR10Q9NZ32 417 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 FBXL4Q9UKA2 621 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 MRTO4Q9UKD2 239 aaKnown RBP8.9□□□□□ -0.98
HOXA1-201ENST00000343060 ATG4BQ9Y4P1 393 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 IRAK3Q9Y616 596 aa8.9□□□□□ -0.98
HOXA1-201ENST00000343060 TRAV14DV4A0A0A6YYC5 116 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 NRG2O14511 850 aaPredicted RBP8.9□□□□□ -0.99
HOXA1-201ENST00000343060 VEGFDO43915 354 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 AGR2O95994 175 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 PTNP21246 168 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 HIST1H1TP22492 207 aaPredicted RBP8.9□□□□□ -0.99
HOXA1-201ENST00000343060 CDK2P24941 298 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 FAUP35544 74 aaKnown RBP8.9□□□□□ -0.99
HOXA1-201ENST00000343060 SLC16A1P53985 500 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 MICBQ29980 383 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 STPG1Q5TH74 334 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 MFSD12Q6NUT3 480 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 TSSK4Q6SA08 328 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 TMEM25Q86YD3 366 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 BPIFCQ8NFQ6 507 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 OR9A2Q8NGT5 310 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 OR10K1Q8NGX5 313 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 OR6N1Q8NGY5 312 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 SYNPRQ8TBG9 265 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 TFGQ92734 400 aaPredicted RBP8.9□□□□□ -0.99
HOXA1-201ENST00000343060 NUS1Q96E22 293 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 C12orf57Q99622 126 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 EQTNQ9NQ60 294 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 PRDM7Q9NQW5 492 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 POT1Q9NUX5 634 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 CENPFP49454 3210 aa8.9□□□□□ -0.99
HOXA1-201ENST00000343060 TP53BP1Q12888 1972 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 IGKV1-8A0A0C4DH67 115 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 DUXAA6NLW8 204 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 H7C2Y5 167 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 H7C417 338 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 GOSR2O14653 212 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 GLSO94925 669 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 SPDEFO95238 335 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 RPN2P04844 631 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 VASPP50552 380 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 RPS15P62841 145 aaKnown RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 DPTQ07507 201 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 ARHGAP11BQ3KRB8 267 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 ARHGAP11AQ6P4F7 1023 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 ABHD17CQ6PCB6 329 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 MUC20Q8N307 709 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 MYLIPQ8WY64 445 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 HERVK_113Q902F9 699 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 CNN2Q99439 309 aaKnown RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 C1orf198Q9H425 327 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 KLHL31Q9H511 634 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 CACYBPQ9HB71 228 aaKnown RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 MTFP1Q9UDX5 166 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 EPHA6Q9UF33 1036 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 SERTAD3Q9UJW9 196 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 MAFFQ9ULX9 164 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 PCYT1BQ9Y5K3 369 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 V9GY05 133 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 TBC1D3KA0A087X1G2 549 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 A0A0D9SG52 128 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 TRBV2A0A0J9YWF9 115 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 CENPVL1A0A0U1RR11 272 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 TBC1D3BA6NDS4 549 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms