RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 ATAD3CQ5T2N8 411 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 LCN1P1Q5VSP4 162 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ARHGAP11AQ6P4F7 1023 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ZNF550Q7Z398 422 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ZNF501Q96CX3 271 aaPredicted RBP13.75□□□□□ -0.21
TPM3-208ENST00000341485 MVB12AQ96EY5 273 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 C4orf36Q96KX1 117 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 CTRCQ99895 268 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 DPYSL5Q9BPU6 564 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 SLC7A5P2Q9GIP4 190 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 NEK6Q9HC98 313 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 HAO2Q9NYQ3 351 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 DHCR7Q9UBM7 475 aaKnown RBP13.75□□□□□ -0.21
TPM3-208ENST00000341485 ZNF221Q9UK13 617 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 RBMX2Q9Y388 322 aaKnown RBP13.75□□□□□ -0.21
TPM3-208ENST00000341485 TMEM184BQ9Y519 407 aaPredicted RBP13.75□□□□□ -0.21
TPM3-208ENST00000341485 B4DXG7 233 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 J3QLW9 94 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 PLPP2O43688 288 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ANKRD34CP0C6C1 535 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 CT45A8P0DMV1 189 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 CT45A9P0DMV2 189 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 SLC2A2P11168 524 aaPredicted RBP13.75□□□□□ -0.21
TPM3-208ENST00000341485 ZNF19P17023 458 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 MAOAP21397 527 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 SHC1P29353 583 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 OR1D4P47884 311 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ATP12AP54707 1039 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 OR12D2P58182 307 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ACY1Q03154 408 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 IL18Q14116 193 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 CT45A2Q5DJT8 189 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 FAM27D1Q5T7N8 215 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 PRAMEF17Q5VTA0 474 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 FAAH2Q6GMR7 532 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ULK3Q6PHR2 472 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 VASH1Q7L8A9 365 aaPredicted RBP13.75□□□□□ -0.21
TPM3-208ENST00000341485 SSX6Q7RTT6 188 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 GPALPP1Q8IXQ4 340 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 UBE2J2Q8N2K1 259 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 Q8N402 240 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 SCAIQ8N9R8 606 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 C17orf47Q8NEP4 570 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 OR5M3Q8NGP4 307 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ZNF486Q96H40 463 aaPredicted RBP13.75□□□□□ -0.21
TPM3-208ENST00000341485 CCDC74BQ96LY2 380 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ERMAPQ96PL5 475 aaPredicted RBP13.75□□□□□ -0.21
TPM3-208ENST00000341485 Q9N2J8 555 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ENAMQ9NRM1 1142 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ERVK-19Q9WJR5 959 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 PCDHGA5Q9Y5G8 931 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 R4GN57 208 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 IGHV5-10-1A0A0J9YXX1 117 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 HYAL3O43820 417 aaPredicted RBP13.74□□□□□ -0.21
TPM3-208ENST00000341485 PRAMEF2O60811 474 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 IFNGP01579 166 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 KRT8P05787 483 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 CD53P19397 219 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 PTBP1P26599 531 aaKnown RBP eCLIP13.74□□□□□ -0.212e-9■■■■■ 36.6
TPM3-208ENST00000341485 PGDP52209 483 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 SLC3A1Q07837 685 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 RIN1Q13671 783 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 IDNKQ5T6J7 187 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 YOD1Q5VVQ6 348 aaPredicted RBP13.74□□□□□ -0.21
TPM3-208ENST00000341485 SLC43A2Q8N370 569 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 RFLNBQ8N5W9 214 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 BCORP1Q8N888 145 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 OR52E2Q8NGJ4 325 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 C16orf52Q8NHV5 167 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 SLC2A12Q8TD20 617 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 SLC35B4Q969S0 331 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 ST6GAL2Q96JF0 529 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 GFM1Q96RP9 751 aaKnown RBP13.74□□□□□ -0.21
TPM3-208ENST00000341485 RPS6KB2Q9UBS0 482 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 CHRNA9Q9UGM1 479 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 ASXL3Q9C0F0 2248 aa13.74□□□□□ -0.21
TPM3-208ENST00000341485 HTR3EA5X5Y0 456 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 LRRN3E7EW58 273 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 SLC19A2O60779 497 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 HIST1H1CP16403 213 aaKnown RBP13.73□□□□□ -0.21
TPM3-208ENST00000341485 FBLP22087 321 aaKnown RBP13.73□□□□□ -0.21
TPM3-208ENST00000341485 F8A1P23610 371 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 HSD17B7P56937 341 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 TRIQKQ629K1 86 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 HBMQ6B0K9 141 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 RPTNQ6XPR3 784 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 SDR9C7Q8NEX9 313 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 OR5J2Q8NH18 312 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 OR4C3Q8NH37 302 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.73□□□□□ -0.21
TPM3-208ENST00000341485 ACOT12Q8WYK0 555 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 SGTBQ96EQ0 304 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 PGLYRP3Q96LB9 341 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 G6PC3Q9BUM1 346 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 OR10A5Q9H207 317 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 MOV10Q9HCE1 1003 aaKnown RBP13.73□□□□□ -0.21
TPM3-208ENST00000341485 ADAM30Q9UKF2 790 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 PCDHGB7Q9Y5F8 929 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 ADAMTS20P59510 1910 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 HEATR5AQ86XA9 2040 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms