RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MBD3L2Q8NHZ7 208 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-202ENST00000340993 SLC25A43Q8WUT9 341 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-202ENST00000340993 TMEM255BQ8WV15 326 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 GEMIN6Q8WXD5 167 aaKnown RBP11.81□□□□□ -0.52
TUBD1-202ENST00000340993 WNT2BQ93097 391 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 MCUR1Q96AQ8 359 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 TIGARQ9NQ88 270 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 DCAF13Q9NV06 445 aaKnown RBP11.81□□□□□ -0.52
TUBD1-202ENST00000340993 RPS6KA6Q9UK32 745 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 PKDREJQ9NTG1 2253 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 ALPK2Q86TB3 2170 aa11.81□□□□□ -0.52
TUBD1-202ENST00000340993 TRAPPC13A5PLN9 417 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 A8MVM7 634 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 SMAD9O15198 467 aaKnown RBP11.8□□□□□ -0.52
TUBD1-202ENST00000340993 PIP5K1CO60331 668 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 CLDN1O95832 211 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 SF3B4Q15427 424 aaKnown RBP eCLIP11.8□□□□□ -0.52
TUBD1-202ENST00000340993 DNAL1Q4LDG9 190 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 MTFR2Q6P444 385 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 CCDC121Q6ZUS5 278 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 GPAT4Q86UL3 456 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 KDM8Q8N371 416 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 LSMEM1Q8N8F7 131 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 OR52J3Q8NH60 311 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 PFN4Q8NHR9 129 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 DNAJA4Q8WW22 397 aaPredicted RBP11.8□□□□□ -0.52
TUBD1-202ENST00000340993 TAAR8Q969N4 342 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 CPNE4Q96A23 557 aaPredicted RBP11.8□□□□□ -0.52
TUBD1-202ENST00000340993 SLC47A1Q96FL8 570 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 ZNF300Q96RE9 604 aaPredicted RBP11.8□□□□□ -0.52
TUBD1-202ENST00000340993 CADM1Q9BY67 442 aaKnown RBP11.8□□□□□ -0.52
TUBD1-202ENST00000340993 HCFC1P51610 2035 aa11.8□□□□□ -0.52
TUBD1-202ENST00000340993 PRSS44E7EML9 344 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 SERPINI2O75830 405 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 DNAJC8O75937 253 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 AHSA1O95433 338 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 HOXD4P09016 255 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 GTF2E2P29084 291 aaKnown RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 CHRNB4P30926 498 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 RAC3P60763 192 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 CSNK2A1P68400 391 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 LSM11P83369 360 aaKnown RBP eCLIP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 VLDLRP98155 873 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 EXOC3L2Q2M3D2 409 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 RIPPLY2Q5TAB7 128 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 DHFR2Q86XF0 187 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 TUSC5Q8IXB3 177 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 TMEM99Q8N816 258 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 RELL2Q8NC24 303 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 PHF10Q8WUB8 498 aaKnown RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 SLC35B4Q969S0 331 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 TM9SF2Q99805 663 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 TAPBPLQ9BX59 468 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 C1orf21Q9H246 121 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 RIMS3Q9UJD0 308 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 PRPF19Q9UMS4 504 aaKnown RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 SAMD4AQ9UPU9 718 aaKnown RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 A0A1W2PNV4 684 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 HSPB2A8KAH6 182 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 ZNF208O43345 1280 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 CHP2O43745 196 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 RCBTB2O95199 551 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 PNMTP11086 282 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 CTSSP25774 331 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 CEACAM8P31997 349 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 TIMP3P35625 211 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 DLX5P56178 289 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 CTBP2P56545 445 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 RASGEF1BQ0VAM2 473 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 HSPB2Q16082 182 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 OTUD3Q5T2D3 398 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 ZNF613Q6PF04 617 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 ZNF808Q8N4W9 903 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 SLC38A4Q969I6 547 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 LRGUKQ96M69 825 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 MOGAT1Q96PD6 335 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 PTDSS2Q9BVG9 487 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 GORASP2Q9H8Y8 452 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 RNF122Q9H9V4 155 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 A4GNTQ9UNA3 340 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 HDGFL3Q9Y3E1 203 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 TESMINQ9Y4I5 508 aa11.79□□□□□ -0.52
TUBD1-202ENST00000340993 FLNBO75369 2602 aaKnown RBP11.79□□□□□ -0.52
TUBD1-202ENST00000340993 A0A087WUJ7 227 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 CLEC18AA5D8T8 446 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 LIPT2A6NK58 231 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 FFAR1O14842 300 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 GSC2O15499 205 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 LYPD3O95274 346 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 CLDN14O95500 239 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 IGHV3-9P01782 118 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 GPIP06744 558 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 FUT1P19526 365 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 UGT2B15P54855 530 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 TRIM25Q14258 630 aaKnown RBP11.78□□□□□ -0.52
TUBD1-202ENST00000340993 FGD3Q5JSP0 725 aa11.78□□□□□ -0.52
TUBD1-202ENST00000340993 TTC33Q6PID6 262 aaPredicted RBP11.78□□□□□ -0.52
TUBD1-202ENST00000340993 CLEC18BQ6UXF7 455 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms