RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 ABHD3Q8WU67 409 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 CPNE4Q96A23 557 aaPredicted RBP12.71□□□□□ -0.38
CTSL-201ENST00000340342 MARVELD3Q96A59 401 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 ZFP3Q96NJ6 502 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 RAB3IPQ96QF0 476 aaPredicted RBP12.71□□□□□ -0.38
CTSL-201ENST00000340342 ENKD1Q9H0I2 346 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 PCDHAC1Q9H158 963 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 MMADHCQ9H3L0 296 aaPredicted RBP12.71□□□□□ -0.38
CTSL-201ENST00000340342 EVA1AQ9H8M9 152 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 TMEM27Q9HBJ8 222 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 TIGARQ9NQ88 270 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 ADPRHL2Q9NX46 363 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 CLEC4AQ9UMR7 237 aa12.71□□□□□ -0.38
CTSL-201ENST00000340342 PRPF19Q9UMS4 504 aaKnown RBP12.71□□□□□ -0.38
CTSL-201ENST00000340342 C19orf84I3L1E1 186 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 DVL2O14641 736 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 ARPC2O15144 300 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 FMO6PO60774 539 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 PDE5AO76074 875 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 THY1P04216 161 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 FCGR2AP12318 317 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 CTSSP25774 331 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 RAC3P60763 192 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 SIRPAP78324 504 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 EGR4Q05215 589 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 TFF3Q07654 80 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 FXNQ16595 210 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 ULK3Q6PHR2 472 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 CBLL1Q75N03 491 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 FAM86B1Q8N7N1 296 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 ACBD4Q8NC06 268 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 ADAMTS16Q8TE57 1224 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 DNAJA4Q8WW22 397 aaPredicted RBP12.7□□□□□ -0.38
CTSL-201ENST00000340342 LZICQ8WZA0 190 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 HSH2DQ96JZ2 352 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 CLPTM1LQ96KA5 538 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 PRDM4Q9UKN5 801 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 HDGFL3Q9Y3E1 203 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 SNX13Q9Y5W8 968 aa12.7□□□□□ -0.38
CTSL-201ENST00000340342 MAST4O15021 2626 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 IGKV1D-42A0A075B6H8 117 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 A0A1W2PNV4 684 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 A8MVM7 634 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 SMAD9O15198 467 aaKnown RBP12.69□□□□□ -0.38
CTSL-201ENST00000340342 NPIPB7O75200 414 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 TNFSF13O75888 250 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 LYPD3O95274 346 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 PMS2P2O95744 297 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 IL18BPO95998 194 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 FKBP2P26885 142 aaKnown RBP12.69□□□□□ -0.38
CTSL-201ENST00000340342 OPRM1P35372 400 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 CLK1P49759 484 aaKnown RBP12.69□□□□□ -0.38
CTSL-201ENST00000340342 MAP2K6P52564 334 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 OR2B6P58173 313 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 CSNK2A1P68400 391 aaPredicted RBP12.69□□□□□ -0.38
CTSL-201ENST00000340342 C1orf140Q5VVS0 124 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 OR2A2Q6IF42 318 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 VWA1Q6PCB0 445 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 ZNF613Q6PF04 617 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 WDR88Q6ZMY6 472 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 FCRLAQ7L513 359 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 CNEP1R1Q8N9A8 125 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 RNF128Q8TEB7 428 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 SLC38A4Q969I6 547 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 UTP4Q969X6 686 aaKnown RBP12.69□□□□□ -0.38
CTSL-201ENST00000340342 SLC47A1Q96FL8 570 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 SELENONQ9NZV5 590 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 V9GYQ6 96 aa12.69□□□□□ -0.38
CTSL-201ENST00000340342 A0A087WUJ7 227 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 TRAPPC13A5PLN9 417 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 LIPT2A6NK58 231 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 ZNF814B7Z6K7 855 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 RAMP1O60894 148 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 GMNNO75496 209 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 PLGP00747 810 aaPredicted RBP12.68□□□□□ -0.38
CTSL-201ENST00000340342 PNMTP11086 282 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 FPR1P21462 350 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 IDUAP35475 653 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 KIR2DL2P43627 348 aaPredicted RBP12.68□□□□□ -0.38
CTSL-201ENST00000340342 FOXD4Q12950 439 aaPredicted RBP12.68□□□□□ -0.38
CTSL-201ENST00000340342 PIN1Q13526 163 aaPredicted RBP12.68□□□□□ -0.38
CTSL-201ENST00000340342 GUSBP1Q15486 140 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 OR7A5Q15622 319 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 PGM2L1Q6PCE3 622 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 FKBP9P1Q75LS8 142 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 KTI12Q96EK9 354 aaPredicted RBP12.68□□□□□ -0.38
CTSL-201ENST00000340342 LRRC46Q96FV0 321 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 PTDSS2Q9BVG9 487 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 SFXN3Q9BWM7 321 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 POTEKPQ9BYX7 375 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 AMBRA1Q9C0C7 1298 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 GORASP2Q9H8Y8 452 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 C12orf10Q9HB07 376 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 DCAF13Q9NV06 445 aaKnown RBP12.68□□□□□ -0.38
CTSL-201ENST00000340342 MAGEL2Q9UJ55 1249 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 SLC7A7Q9UM01 511 aa12.68□□□□□ -0.38
CTSL-201ENST00000340342 RRP15Q9Y3B9 282 aaKnown RBP12.68□□□□□ -0.38
CTSL-201ENST00000340342 TACC2O95359 2948 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms