RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ATG4DQ86TL0 474 aaPredicted RBP12.94□□□□□ -0.34
ERCC1-203ENST00000340192 ARMC8Q8IUR7 673 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 ZNF100Q8IYN0 542 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 C11orf65Q8NCR3 313 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 HS3ST6Q96QI5 342 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 NAA11Q9BSU3 229 aaPredicted RBP12.94□□□□□ -0.34
ERCC1-203ENST00000340192 KAT8Q9H7Z6 458 aaKnown RBP12.94□□□□□ -0.34
ERCC1-203ENST00000340192 SAR1AQ9NR31 198 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 MRGBPQ9NV56 204 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 NOSIPQ9Y314 301 aaKnown RBP12.94□□□□□ -0.34
ERCC1-203ENST00000340192 VPS13CQ709C8 3753 aa12.94□□□□□ -0.34
ERCC1-203ENST00000340192 HIVEP1P15822 2718 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 PRORSD1PA6NEY8 169 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 TMEM229AB2RXF0 380 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 KLF4O43474 513 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 SERPINB7O75635 380 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 ATE1O95260 518 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 HTR2AP28223 471 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 LOXP28300 417 aaPredicted RBP12.93□□□□□ -0.34
ERCC1-203ENST00000340192 ADSLP30566 484 aaPredicted RBP12.93□□□□□ -0.34
ERCC1-203ENST00000340192 NTF4P34130 210 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 PCBP3P57721 371 aaKnown RBP12.93□□□□□ -0.34
ERCC1-203ENST00000340192 RBBP4Q09028 425 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 KLF10Q13118 480 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 ITGADQ13349 1161 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 KEAP1Q14145 624 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 TRMT5Q32P41 509 aaKnown RBP12.93□□□□□ -0.34
ERCC1-203ENST00000340192 C1orf140Q5VVS0 124 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 PAQR6Q6TCH4 344 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 WFDC8Q8IUA0 241 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 KISS1RQ969F8 398 aaPredicted RBP12.93□□□□□ -0.34
ERCC1-203ENST00000340192 FOXC2Q99958 501 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 RPS6KB2Q9UBS0 482 aa12.93□□□□□ -0.34
ERCC1-203ENST00000340192 RAI1Q7Z5J4 1906 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 ELOA3DA6NLF2 546 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 ATP8B1O43520 1251 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 NPIPB7O75200 414 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 MRPL33O75394 65 aaKnown RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 LYZL6O75951 148 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 MFN2O95140 757 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 AKR7A3O95154 331 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 CNOT4O95628 575 aaKnown RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 IGHV3-9P01782 118 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 DMTNQ08495 405 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 CYLC2Q14093 348 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 SLC17A1Q14916 467 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 ELOA3BQ3SY89 546 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 BEX5Q5H9J7 111 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 OTUD3Q5T2D3 398 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 ALKBH2Q6NS38 261 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 NANOGP8Q6NSW7 305 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 BHLHA15Q7RTS1 189 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 NET1Q7Z628 596 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 UBE2J2Q8N2K1 259 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 TMEM99Q8N816 258 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 LSMEM1Q8N8F7 131 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 SMYD1Q8NB12 490 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 BHLHE22Q8NFJ8 381 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 ELOA3Q8NG57 546 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 OR52E4Q8NGH9 312 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 OR10A6Q8NH74 314 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 APH1AQ96BI3 265 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 MBD6Q96DN6 1003 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 ZNF317Q96PQ6 595 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-203ENST00000340192 PRR14Q9BWN1 585 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 TAPBPLQ9BX59 468 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 CXXC4Q9H2H0 198 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 NANOGQ9H9S0 305 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 ADPRHL2Q9NX46 363 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 KLHL14Q9P2G3 628 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 FLVCR1Q9Y5Y0 555 aa12.92□□□□□ -0.34
ERCC1-203ENST00000340192 PRR14LQ5THK1 2151 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 A0A1B0GWA3 101 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 AQP7P3A6NL99 342 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 BBIP1A8MTZ0 92 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 MRASO14807 208 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 OPN1SWP03999 348 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 COX5AP20674 150 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 IGHV1-2P23083 117 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 PCGF2P35227 344 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 RGS8P57771 180 aaPredicted RBP12.91□□□□□ -0.34
ERCC1-203ENST00000340192 NCALDP61601 193 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 EGR4Q05215 589 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 MAPRE2Q15555 327 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 TAB1Q15750 504 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 MMEL1Q495T6 779 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 COQ5Q5HYK3 327 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 FBXW9Q5XUX1 488 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 REP15Q6BDI9 236 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 C6orf89Q6UWU4 347 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 CASP12Q6UXS9 341 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 SNX32Q86XE0 403 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 SLC30A8Q8IWU4 369 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 STK35Q8TDR2 534 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 C10orf82Q8WW14 230 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 HSD17B8Q92506 261 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 LRRC58Q96CX6 371 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 PLPPR2Q96GM1 343 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 ALPK1Q96QP1 1244 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms