RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 PCDHGA1Q9Y5H4 931 aa8.11□□□□□ -1.11
RTN3-202ENST00000339997 TAF1P21675 1872 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 CDHR4A6H8M9 788 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 TMEM202A6NGA9 273 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 H3BNC9 293 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 NPC1O15118 1278 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SLC2A10O95528 541 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 HLA-FP30511 346 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 ADRA1AP35348 466 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 RPS18P62269 152 aaKnown RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 MAT1AQ00266 395 aaKnown RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 TNFRSF17Q02223 184 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 PEA15Q15121 130 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 OR1Q1Q15612 314 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 FAM74A1Q5RGS3 127 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 FAM27D1Q5T7N8 215 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 HIST2H3PS2Q5TEC6 136 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 MEPCEQ7L2J0 689 aaKnown RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 PELI3Q8N2H9 469 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 ZNF808Q8N4W9 903 aaPredicted RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 SUMF1Q8NBK3 374 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 OR52R1Q8NGF1 315 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 OR13C5Q8NGS8 318 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 GPR150Q8NGU9 434 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 MR1Q95460 341 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 KATNB1Q9BVA0 655 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 NOX4Q9NPH5 578 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 TM7SF3Q9NS93 570 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 PLCXD1Q9NUJ7 323 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 TMEM100Q9NV29 134 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 CNOT2Q9NZN8 540 aaKnown RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 TMEM269A0A1B0GVZ9 245 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 UNCXA6NJT0 531 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 LILRB3O75022 631 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 KLKB1P03952 638 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 ITGB2P05107 769 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 KLK3P07288 261 aaPredicted RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 CHRM4P08173 479 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 PNMTP11086 282 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SLC2A1P11166 492 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SLC19A1P41440 591 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SLC35A2P78381 396 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 OR7A5Q15622 319 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 CLEC12BQ2HXU8 276 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SYT6Q5T7P8 510 aaPredicted RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 RPL13AP3Q6NVV1 102 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 FBXW12Q6X9E4 464 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 OR56B4Q8NH76 319 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SLC7A13Q8TCU3 470 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SETD7Q8WTS6 366 aaKnown RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 MOAP1Q96BY2 351 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 ZNF582Q96NG8 517 aaPredicted RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 SNX18Q96RF0 628 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 GAS2L1Q99501 681 aaPredicted RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 SULT4A1Q9BR01 284 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 PTDSS2Q9BVG9 487 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SLC17A9Q9BYT1 436 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SELENOIQ9C0D9 397 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 TMEM45AQ9NWC5 275 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SLC7A11Q9UPY5 501 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 TCRBV5S1A1TA0A578 114 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 OR2A25A4D2G3 310 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 C2orf72A6NCS6 295 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 GMDSO60547 372 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 DIRAS3O95661 229 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SERPINA7P05543 415 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 CD6P30203 668 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 PRKAR1BP31321 381 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 TRIM23P36406 574 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 HHEXQ03014 270 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 POU4F2Q12837 409 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 TNK1Q13470 666 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 BAK1Q16611 211 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 DLEU7Q6UYE1 221 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 RDH10Q8IZV5 341 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 TMEM217Q8N7C4 229 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 ZBTB44Q8NCP5 570 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 TMEM234Q8WY98 164 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 WDR92Q96MX6 357 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 ZNF416Q9BWM5 594 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 ARNT2Q9HBZ2 717 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 ZNF334Q9HCZ1 680 aaPredicted RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 C1GALT1Q9NS00 363 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SERTAD4Q9NUC0 356 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 MUTYHQ9UIF7 546 aa8.1□□□□□ -1.11
RTN3-202ENST00000339997 SPTBN1Q01082 2364 aaKnown RBP8.1□□□□□ -1.11
RTN3-202ENST00000339997 TCRBV21S2A2A0A5A6 115 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 ZBTB42B2RXF5 422 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 C9J4A7 227 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 PEX12O00623 359 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 TPT1P13693 172 aaKnown RBP8.09□□□□□ -1.11
RTN3-202ENST00000339997 CD79BP40259 229 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 AKR1C3P42330 323 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 RPS21P63220 83 aaKnown RBP8.09□□□□□ -1.11
RTN3-202ENST00000339997 CST6Q15828 149 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 PKDCCQ504Y2 493 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 HEPHL1Q6MZM0 1159 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 CPEB2Q7Z5Q1 589 aaKnown RBP8.09□□□□□ -1.11
RTN3-202ENST00000339997 RCBTB1Q8NDN9 531 aa8.09□□□□□ -1.11
RTN3-202ENST00000339997 OR1J4Q8NGS1 313 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms