RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 DPY19L1Q2PZI1 675 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 IQCCQ4KMZ1 466 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 C9orf135Q5VTT2 229 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 TMEM225Q6GV28 225 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 EMBQ6PCB8 327 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 PAQR6Q6TCH4 344 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 B3GLCTQ6Y288 498 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 AAED1Q7RTV5 226 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 TRIML2Q8N7C3 387 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 NEURL3Q96EH8 262 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 DNAJA3Q96EY1 480 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 SF3B5Q9BWJ5 86 aaKnown RBP12.45□□□□□ -0.42
COMMD4-202ENST00000338995 ROPN1BQ9BZX4 212 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-202ENST00000338995 ROPN1Q9HAT0 212 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-202ENST00000338995 MOV10Q9HCE1 1003 aaKnown RBP12.45□□□□□ -0.42
COMMD4-202ENST00000338995 SLC7A10Q9NS82 523 aa12.45□□□□□ -0.42
COMMD4-202ENST00000338995 CENPVL1A0A0U1RR11 272 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 LOC390937A0A1W2PQ73 354 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 OR6C65A6NJZ3 312 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 CRYAAP02489 173 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 C8BP07358 591 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 BPGMP07738 259 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 ERCC1P07992 297 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-202ENST00000338995 APEHP13798 732 aaKnown RBP12.44□□□□□ -0.42
COMMD4-202ENST00000338995 IL7RP16871 459 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 CDH2P19022 906 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-202ENST00000338995 CXCR1P25024 350 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 S100A3P33764 101 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 SERPINF1P36955 418 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 UBE2NP61088 152 aaKnown RBP12.44□□□□□ -0.42
COMMD4-202ENST00000338995 SLC17A1Q14916 467 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 CARTPTQ16568 116 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 TSPO2Q5TGU0 170 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 SAXO2Q658L1 398 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 FRRS1Q6ZNA5 592 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 OLIG3Q7RTU3 272 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 ZNF440Q8IYI8 595 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 TMEM45BQ96B21 275 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 ZG16BQ96DA0 208 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 TRNT1Q96Q11 434 aaKnown RBP12.44□□□□□ -0.42
COMMD4-202ENST00000338995 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-202ENST00000338995 SLC35A5Q9BS91 424 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 TAPBPLQ9BX59 468 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 AKTIPQ9H8T0 292 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 OSGIN1Q9UJX0 560 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 MOKQ9UQ07 419 aa12.44□□□□□ -0.42
COMMD4-202ENST00000338995 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-202ENST00000338995 CFAP73A6NFT4 308 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 B9A039 149 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 FAAHO00519 579 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 SCN2BO60939 215 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 VAMP5O95183 116 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 ZNF16P17020 682 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-202ENST00000338995 TACR3P29371 465 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 NR4A2P43354 598 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 FOXG1P55316 489 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-202ENST00000338995 COPZ1P61923 177 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 LRRC74AQ0VAA2 488 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 SWI5Q1ZZU3 235 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 OTUD3Q5T2D3 398 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-202ENST00000338995 LRRC74BQ6ZQY2 392 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 SLC46A3Q7Z3Q1 461 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 ANKRD46Q86W74 232 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 CNOT9Q92600 299 aaKnown RBP12.43□□□□□ -0.42
COMMD4-202ENST00000338995 TESCQ96BS2 214 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 AURKBQ96GD4 344 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-202ENST00000338995 RAB1BQ9H0U4 201 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 CHODLQ9H9P2 273 aa12.43□□□□□ -0.42
COMMD4-202ENST00000338995 YLPM1P49750 1951 aaKnown RBP12.43□□□□□ -0.42
COMMD4-202ENST00000338995 TMEM72A0PK05 275 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 AGAP5A6NIR3 686 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 ATP6V1G2-DDX39BF2Z307 99 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 TGFAP01135 160 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 DBIP07108 87 aaKnown RBP12.42□□□□□ -0.42
COMMD4-202ENST00000338995 NR2F1P10589 423 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 IMPDH2P12268 514 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 HOXB1P14653 301 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-202ENST00000338995 CEACAM7Q14002 265 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 CASP8Q14790 479 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 PDCD2Q16342 344 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-202ENST00000338995 ZSWIM7Q19AV6 140 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 KRTAP24-1Q3LI83 254 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 FAM120AOSQ5T036 256 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 PEX5LQ8IYB4 626 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 OR9K2Q8NGE7 335 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 WDR60Q8WVS4 1066 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 BOD1Q96IK1 185 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 PPP1R36Q96LQ0 422 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 FOXN4Q96NZ1 517 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 ZNF317Q96PQ6 595 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-202ENST00000338995 C19orf24Q9BVV8 132 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 CACYBPQ9HB71 228 aaKnown RBP12.42□□□□□ -0.42
COMMD4-202ENST00000338995 LGALS13Q9UHV8 139 aa12.42□□□□□ -0.42
COMMD4-202ENST00000338995 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.42□□□□□ -0.421e-8■■■■□ 24.7
COMMD4-202ENST00000338995 CLDN24A6NM45 220 aa12.41□□□□□ -0.42
COMMD4-202ENST00000338995 VWC2LB2RUY7 222 aa12.41□□□□□ -0.42
COMMD4-202ENST00000338995 HMGN4O00479 90 aa12.41□□□□□ -0.42
COMMD4-202ENST00000338995 KLF11O14901 512 aa12.41□□□□□ -0.42
COMMD4-202ENST00000338995 ZNF500O60304 480 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms