RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 HPGDP15428 266 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 MAGEA8P43361 318 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 NCBP2P52298 156 aaKnown RBP eCLIP12.97□□□□□ -0.33
TSPO-202ENST00000337554 RAE1P78406 368 aaKnown RBP12.97□□□□□ -0.33
TSPO-202ENST00000337554 ALKBH6Q3KRA9 238 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 KLHL26Q53HC5 615 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 SGO1Q5FBB7 561 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 HP1BP3Q5SSJ5 553 aaPredicted RBP12.97□□□□□ -0.33
TSPO-202ENST00000337554 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.97□□□□□ -0.33
TSPO-202ENST00000337554 CCNJQ5T5M9 372 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 STEAP4Q687X5 459 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 MTERF4Q7Z6M4 381 aaKnown RBP12.97□□□□□ -0.33
TSPO-202ENST00000337554 PPIL6Q8IXY8 311 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 POMGNT2Q8NAT1 580 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 OR10S1Q8NGN2 331 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 ST7LQ8TDW4 575 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 TMEM45BQ96B21 275 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 AURKBQ96GD4 344 aaPredicted RBP12.97□□□□□ -0.33
TSPO-202ENST00000337554 ZNF317Q96PQ6 595 aaPredicted RBP12.97□□□□□ -0.33
TSPO-202ENST00000337554 NAT9Q9BTE0 207 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 VPS11Q9H270 941 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 GLIPR2Q9H4G4 154 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 NOX4Q9NPH5 578 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 EQTNQ9NQ60 294 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 UBAP1Q9NZ09 502 aa12.97□□□□□ -0.33
TSPO-202ENST00000337554 TTC36A6NLP5 189 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 TMEM229AB2RXF0 380 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 ACP2P11117 423 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 CDC25BP30305 580 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 GLRXP35754 106 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 PAX2Q02962 417 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 LCP2Q13094 533 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 FXNQ16595 210 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 MMEL1Q495T6 779 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 RAB1CQ92928 201 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 CFAP36Q96G28 342 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 ZNF385AQ96PM9 386 aaKnown RBP12.96□□□□□ -0.33
TSPO-202ENST00000337554 TOR3AQ9H497 397 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 GIMAP4Q9NUV9 329 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 POMT1Q9Y6A1 747 aa12.96□□□□□ -0.33
TSPO-202ENST00000337554 C17orf100A8MU93 164 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 DNAJA2O60884 412 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 SKAP2O75563 359 aaPredicted RBP12.95□□□□□ -0.34
TSPO-202ENST00000337554 PIAS1O75925 651 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 ZNF35P13682 527 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 LCN1P31025 176 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 EGR3Q06889 387 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 NPRL3Q12980 569 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 HNRNPA0Q13151 305 aaKnown RBP12.95□□□□□ -0.34
TSPO-202ENST00000337554 PAQR6Q6TCH4 344 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 USP51Q70EK9 711 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 OR6Y1Q8NGX8 325 aa12.95□□□□□ -0.34
TSPO-202ENST00000337554 NOL11Q9H8H0 719 aaKnown RBP12.95□□□□□ -0.34
TSPO-202ENST00000337554 MOV10Q9HCE1 1003 aaKnown RBP12.95□□□□□ -0.34
TSPO-202ENST00000337554 STARD9Q9P2P6 4700 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 AGAP5A6NIR3 686 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 A8MXK9 166 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 DNPH1O43598 174 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 PDYNP01213 254 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 SLC6A9P48067 706 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 SLC12A2P55011 1212 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 KRTAP10-11P60412 298 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 HERPUD1Q15011 391 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 ZKSCAN8Q15776 578 aaPredicted RBP12.94□□□□□ -0.34
TSPO-202ENST00000337554 DUSP5Q16690 384 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 OR5W2Q8NH69 310 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 MUC7Q8TAX7 377 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 CFHR4Q92496 578 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 ZHX1-C8orf76Q96EF9 292 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 GIMAP5Q96F15 307 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 TIMD4Q96H15 378 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 AMDHD1Q96NU7 426 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 ALKBH3Q96Q83 286 aaPredicted RBP12.94□□□□□ -0.34
TSPO-202ENST00000337554 TSPAN32Q96QS1 320 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 NPHS2Q9NP85 383 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 NKIRAS2Q9NYR9 191 aa12.94□□□□□ -0.34
TSPO-202ENST00000337554 DSPPQ9NZW4 1301 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 RSL1D1O76021 490 aaKnown RBP12.93□□□□□ -0.34
TSPO-202ENST00000337554 BCKDHAP12694 445 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
TSPO-202ENST00000337554 ARR3P36575 388 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 ELK3P41970 407 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 SESN3P58005 492 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 MGAT5Q09328 741 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 TRAF3Q13114 568 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 FRG1Q14331 258 aaKnown RBP12.93□□□□□ -0.34
TSPO-202ENST00000337554 PFKFB4Q16877 469 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 NRN1LQ496H8 165 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 GLIPR1L2Q4G1C9 344 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 KLHL22Q53GT1 634 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 EXOSC6Q5RKV6 272 aaKnown RBP12.93□□□□□ -0.34
TSPO-202ENST00000337554 MDP1Q86V88 176 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 IL17RDQ8NFM7 739 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 C16orf78Q8WTQ4 265 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 LRRC39Q96DD0 335 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 ZNF75AQ96N20 296 aa12.93□□□□□ -0.34
TSPO-202ENST00000337554 OR11A1Q9GZK7 315 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms