RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SLC29A1Q99808 456 aa12.22□□□□□ -0.45
HLCS-201ENST00000336648 RTP3Q9BQQ7 232 aa12.22□□□□□ -0.45
HLCS-201ENST00000336648 CACNA1FO60840 1977 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 SLC16A7O60669 478 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 KCNK2O95069 426 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 CRHBPP24387 322 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 XCR1P46094 333 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 TPMTP51580 245 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 EMX1Q04741 257 aaPredicted RBP12.21□□□□□ -0.45
HLCS-201ENST00000336648 DNAJA3Q96EY1 480 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 MED30Q96HR3 178 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 RNF170Q96K19 258 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 SLC25A18Q9H1K4 315 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 GABRQQ9UN88 632 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 CEPT1Q9Y6K0 416 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 MYOM1P52179 1685 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 FBXO45P0C2W1 286 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 SLC2A1P11166 492 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.45
HLCS-201ENST00000336648 CLDN6P56747 220 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 ARG2P78540 354 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 SFRP5Q5T4F7 317 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 PIP5KL1Q5T9C9 394 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 BPIFB2Q8N4F0 458 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 MFSD9Q8NBP5 474 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 RHOXF1Q8NHV9 184 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 LIN7BQ9HAP6 207 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 NIT2Q9NQR4 276 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 PCDHB10Q9UN67 800 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 RPH3ALQ9UNE2 315 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 ZNF44P15621 663 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 ZNF542PQ5EBM4 170 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 OR10K2Q6IF99 312 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 Q6ZSR6 202 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 KDM8Q8N371 416 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 OR10R2Q8NGX6 335 aa12.21□□□□□ -0.45
HLCS-201ENST00000336648 CYTIPO60759 359 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 UBE2G2P60604 165 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 HBG1P69891 147 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 HBG2P69892 147 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 FAM189BP81408 668 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 PDE7AQ13946 482 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 B3GNT8Q7Z7M8 397 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 CD163Q86VB7 1156 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 NLGN4XQ8N0W4 816 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 MMP21Q8N119 569 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 GPR26Q8NDV2 337 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 NPRL2Q8WTW4 380 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 FIZ1Q96SL8 496 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 USP36Q9P275 1121 aaKnown RBP12.21□□□□□ -0.46
HLCS-201ENST00000336648 A8MVM7 634 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 HPGDSO60760 199 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 HLA-AP01891 365 aaKnown RBP12.21□□□□□ -0.46
HLCS-201ENST00000336648 MBP02144 154 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 TIMP2P16035 220 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 GIFP27352 417 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 VIPR2P41587 438 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 SLC7A9P82251 487 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 DBPQ10586 325 aaPredicted RBP12.21□□□□□ -0.46
HLCS-201ENST00000336648 VAMP3Q15836 100 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 SCD5Q86SK9 330 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 TMEM200AQ86VY9 491 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 WDR5BQ86VZ2 330 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 TCTN2Q96GX1 697 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 MCOLN1Q9GZU1 580 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 EHFQ9NZC4 300 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 ROBO1Q9Y6N7 1651 aa12.21□□□□□ -0.46
HLCS-201ENST00000336648 UBR1Q8IWV7 1749 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 A0A0A6YYC8 382 aaPredicted RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 FAM171A2A8MVW0 826 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 I3L1I5 382 aaPredicted RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 YY2O15391 372 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 ADAM12O43184 909 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SLC10A3P09131 477 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 JAG1P78504 1218 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 ZXDBP98169 803 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 DEFB110Q30KQ9 67 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 FCRLBQ6BAA4 426 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SSX7Q7RTT5 188 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 ASB11Q8WXH4 323 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 GGHQ92820 318 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SAT2Q96F10 170 aaPredicted RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 ULBP2Q9BZM5 246 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SEMA6CQ9H3T2 930 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 PDLIM7Q9NR12 457 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SEMA4GQ9NTN9 838 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 CA14Q9ULX7 337 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 KLK4Q9Y5K2 254 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 ETV7Q9Y603 341 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 A0A1W2PQ09 198 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 POM121CA8CG34 1229 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SGK494L7N484 410 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 OR2T7P0C7T2 308 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 AOAHP28039 575 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 TNFSF8P32971 234 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 MRPS34P82930 218 aaKnown RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 ZNF74Q16587 644 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 HEPHL1Q6MZM0 1159 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 LIPIQ6XZB0 460 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 WDR88Q6ZMY6 472 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms