RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 LYPD8Q6UX82 237 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 KLHL36Q8N4N3 616 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 TMEM99Q8N816 258 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 LRRC75AQ8NAA5 344 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 ZNF485Q8NCK3 441 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 TM9SF4Q92544 642 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 SLIRPQ9GZT3 109 aaKnown RBP11.32□□□□□ -0.6
ZNF548-201ENST00000336128 EXOSC4Q9NPD3 245 aaKnown RBP11.32□□□□□ -0.6
ZNF548-201ENST00000336128 NANSQ9NR45 359 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 FBXL4Q9UKA2 621 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 STUB1Q9UNE7 303 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 HIF3AQ9Y2N7 669 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 TMED7-TICAM2A0A0A6YYA0 188 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 CDX4O14627 284 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-201ENST00000336128 ARPC3O15145 178 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 WISP1O95388 367 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 ASAH2BP0C7U1 165 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 BMXP51813 675 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 POLR2HP52434 150 aaKnown RBP11.32□□□□□ -0.6
ZNF548-201ENST00000336128 ZNF517Q6ZMY9 492 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-201ENST00000336128 NUP54Q7Z3B4 507 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 NAXDQ8IW45 347 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 OR52N1Q8NH53 320 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 SLC22A8Q8TCC7 542 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 RNF138Q8WVD3 245 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 TAAR8Q969N4 342 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 TEAD3Q99594 435 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 ARHGAP9Q9BRR9 750 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 KATNB1Q9BVA0 655 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 DEFB126Q9BYW3 111 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 NRIP3Q9NQ35 241 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 KLHL1Q9NR64 748 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 TAS2R10Q9NYW0 307 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 CCDC59Q9P031 241 aaKnown RBP11.32□□□□□ -0.6
ZNF548-201ENST00000336128 MYOTQ9UBF9 498 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 TMED7Q9Y3B3 224 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 B3GALT1Q9Y5Z6 326 aa11.32□□□□□ -0.6
ZNF548-201ENST00000336128 TRAV36DV7A0A075B6V5 113 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 IGHV1-45A0A0A0MS14 117 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 TMEM72A0PK05 275 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 C2orf72A6NCS6 295 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 ANKUB1A6NFN9 424 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 C12orf71A8MTZ7 269 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 BLOC1S5-TXNDC5H3BN57 136 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 SUSD5O60279 629 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 KLF7O75840 302 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-201ENST00000336128 OR2J2O76002 312 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 BGLAPP02818 100 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 GYPBP06028 91 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 UQCRC1P31930 480 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 CRYBB2P43320 205 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 RPS5P46782 204 aaKnown RBP11.31□□□□□ -0.6
ZNF548-201ENST00000336128 TPBGQ13641 420 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 ISXQ2M1V0 245 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 BTBD16Q32M84 506 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 GRINAQ7Z429 371 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 ACBD7Q8N6N7 88 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 SPRYD4Q8WW59 207 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-201ENST00000336128 TTC9Q92623 222 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 UFD1Q92890 307 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 BORCS5Q969J3 196 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 RASD2Q96D21 266 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 STRADBQ9C0K7 418 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 ZNF700Q9H0M5 742 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 ADGRL4Q9HBW9 690 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 ZNF229Q9UJW7 825 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 SLC6A5Q9Y345 797 aa11.31□□□□□ -0.6
ZNF548-201ENST00000336128 METTL15A6NJ78 407 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 IDH3BO43837 385 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 MRPL3P09001 348 aaKnown RBP11.3□□□□□ -0.6
ZNF548-201ENST00000336128 FBXO45P0C2W1 286 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 COX6A1P12074 109 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 PSMA1P25786 263 aaKnown RBP11.3□□□□□ -0.6
ZNF548-201ENST00000336128 TMED10P49755 219 aaKnown RBP11.3□□□□□ -0.6
ZNF548-201ENST00000336128 SUMO3P55854 103 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-201ENST00000336128 C17orf67Q0P5P2 114 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 ZNF829Q3KNS6 432 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-201ENST00000336128 ANKDD1AQ495B1 522 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 ZNF322Q6U7Q0 402 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-201ENST00000336128 GDPGP1Q6ZNW5 385 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 NANOGNBQ7Z5D8 188 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 SLC15A4Q8N697 577 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 ZFP41Q8N8Y5 198 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 OR10H4Q8NGA5 316 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 OR6Q1Q8NGQ2 317 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 OR2Y1Q8NGV0 311 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 MCFD2Q8NI22 146 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 ELP5Q8TE02 316 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 TRMT61AQ96FX7 289 aaKnown RBP11.3□□□□□ -0.6
ZNF548-201ENST00000336128 TBX5Q99593 518 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 FKRPQ9H9S5 495 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 GALNT9Q9HCQ5 603 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 PCDHGB6Q9Y5F9 930 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 HS3ST3B1Q9Y662 390 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 TEX13CA0A0J9YWL9 993 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 PNMA8CA0A1B0GUJ8 204 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 PMS2P1A4D2B8 440 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 PLD2O14939 933 aa11.3□□□□□ -0.6
ZNF548-201ENST00000336128 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms