RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 RPTNQ6XPR3 784 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 PAPD5Q8NDF8 572 aaKnown RBP12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 OR52J3Q8NH60 311 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 TMEM239Q8WW34 195 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 TAAR8Q969N4 342 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 DHRS1Q96LJ7 313 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 HS6ST2Q96MM7 605 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 EPYCQ99645 322 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 ZNF426Q9BUY5 554 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 SRXN1Q9BYN0 137 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 DENND2DQ9H6A0 471 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 YY1AP1Q9H869 796 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 TRAPPC4Q9Y296 219 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 A0A1W2PRQ8 180 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 RAC3P60763 192 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 DGCR6Q14129 220 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 PON3Q15166 354 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 OR7A5Q15622 319 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 RTL6Q6ICC9 239 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 PODNL1Q6PEZ8 512 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 P4HA3Q7Z4N8 544 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 ADGRE4PQ86SQ3 457 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 RPRMLQ8N4K4 120 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 C10orf53Q8N6V4 93 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 PFN4Q8NHR9 129 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 CPNE4Q96A23 557 aaPredicted RBP12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 SLC25A36Q96CQ1 311 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 PTDSS2Q9BVG9 487 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 TAPBPLQ9BX59 468 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 PRRG4Q9BZD6 226 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 SLC19A3Q9BZV2 496 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 ANKRD19PQ9H560 264 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 CALHM2Q9HA72 323 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 MCTS1Q9ULC4 181 aaKnown RBP12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 FAM215AQ9Y5M1 114 aa12.62□□□□□ -0.39
APOBEC3B-202ENST00000335760 A0A087WUU8 490 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 IGHV3-15A0A0B4J1V0 119 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 TRBV4-1A0A0J9YWV2 114 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 CD8B2A6NJW9 211 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 LIPT2A6NK58 231 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 SLC22A20A6NK97 555 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 CCL21O00585 134 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 OR2T1O43869 369 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 PIP5K1CO60331 668 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 TIPRLO75663 272 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 CST1P01037 141 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 FPR1P21462 350 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 CBLP22681 906 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 SLC35A1P78382 337 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 NSUN5P2Q63ZY6 315 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 OR2T5Q6IEZ7 315 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 TBPL2Q6SJ96 375 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 B3GNT6Q6ZMB0 384 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 ZNF730Q6ZMV8 503 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 ZNF771Q7L3S4 317 aaPredicted RBP12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 OR2T29Q8NH02 315 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 MFSD8Q8NHS3 518 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 FNDC9Q8TBE3 224 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 SLC7A13Q8TCU3 470 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 ACOT11Q8WXI4 607 aaPredicted RBP12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 ROBO4Q8WZ75 1007 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 ZHX1-C8orf76Q96EF9 292 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 DUS3LQ96G46 650 aaKnown RBP12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 UCN2Q96RP3 112 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 MEPEQ9NQ76 525 aaPredicted RBP12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 CLCF1Q9UBD9 225 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 MEMO1Q9Y316 297 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 MED31Q9Y3C7 131 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 ZNF175Q9Y473 711 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 AP4S1Q9Y587 144 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 MPDZO75970 2070 aa12.61□□□□□ -0.39
APOBEC3B-202ENST00000335760 A0A1B0GUH1 482 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 ENO4A6NNW6 628 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 FTCDNL1E5RQL4 147 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 LRRN3E7EW58 273 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 E9PLN8 166 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 TNFRSF11BO00300 401 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 GNGT2O14610 69 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 LRRTM2O43300 516 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 KRT36O76013 467 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 TGM6O95932 706 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 BGLAPP02818 100 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 GLI4P10075 376 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 KLK2P20151 261 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 ENPP1P22413 925 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 GTF2E2P29084 291 aaKnown RBP12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 LSM11P83369 360 aaKnown RBP eCLIP12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 LTBQ06643 244 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 PMPCAQ10713 525 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 FAM69AQ5T7M9 428 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 SEM1Q6ZVN7 128 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 MBOAT2Q6ZWT7 520 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 RRM2BQ7LG56 351 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 FJX1Q86VR8 437 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 C10orf67Q8IYJ2 551 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 RNF113BQ8IZP6 322 aaKnown RBP12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 OR6S1Q8NH40 331 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 PYDC1Q8WXC3 89 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms