RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 CPNE4Q96A23 557 aaPredicted RBP14.37□□□□□ -0.11
LRRC28-202ENST00000331450 KTI12Q96EK9 354 aaPredicted RBP14.37□□□□□ -0.11
LRRC28-202ENST00000331450 PIP5K1AQ99755 562 aa14.37□□□□□ -0.11
LRRC28-202ENST00000331450 SLC19A3Q9BZV2 496 aa14.37□□□□□ -0.11
LRRC28-202ENST00000331450 ANKRD19PQ9H560 264 aa14.37□□□□□ -0.11
LRRC28-202ENST00000331450 NMNAT1Q9HAN9 279 aaPredicted RBP14.37□□□□□ -0.11
LRRC28-202ENST00000331450 RHCGQ9UBD6 479 aa14.37□□□□□ -0.11
LRRC28-202ENST00000331450 NBASA2RRP1 2371 aa14.37□□□□□ -0.11
LRRC28-202ENST00000331450 HIVEP3Q5T1R4 2406 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 LIPT2A6NK58 231 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 SLC22A20A6NK97 555 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 SULT2B1O00204 365 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 SMAD9O15198 467 aaKnown RBP14.36□□□□□ -0.11
LRRC28-202ENST00000331450 LRRTM2O43300 516 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 AHSA1O95433 338 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 TGM6O95932 706 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 RAP2AP10114 183 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 HOXB6P17509 224 aaKnown RBP14.36□□□□□ -0.11
LRRC28-202ENST00000331450 PTNP21246 168 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 IFNA8P32881 189 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 TIMP3P35625 211 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 UGT2B15P54855 530 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 NUP107P57740 925 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 CSNK2A1P68400 391 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-202ENST00000331450 H3F3AP84243 136 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 CCNIQ14094 377 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 TRAM2Q15035 370 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 SGCBQ16585 318 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 CHMP1BQ7LBR1 199 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 FJX1Q86VR8 437 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 P3H2Q8IVL5 708 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 PAPD5Q8NDF8 572 aaKnown RBP14.36□□□□□ -0.11
LRRC28-202ENST00000331450 OR6S1Q8NH40 331 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 MFSD8Q8NHS3 518 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 FNDC9Q8TBE3 224 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 RNF128Q8TEB7 428 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 DNAJA3Q96EY1 480 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 FUZQ9BT04 418 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 FNDC11Q9BVV2 318 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 MEPEQ9NQ76 525 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-202ENST00000331450 TIGARQ9NQ88 270 aa14.36□□□□□ -0.11
LRRC28-202ENST00000331450 FAM32AQ9Y421 112 aaKnown RBP14.36□□□□□ -0.11
LRRC28-202ENST00000331450 TRAV36DV7A0A075B6V5 113 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 A0A1W2PRQ8 180 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 CLEC18AA5D8T8 446 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 CIB2O75838 187 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 AQP8O94778 261 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 IGF2P01344 180 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 MT-ND1P03886 318 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 H1F0P07305 194 aaKnown RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 FCGR2AP12318 317 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 NQO1P15559 274 aaKnown RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 KLK2P20151 261 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 CEACAM8P31997 349 aaPredicted RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 RPS5P46782 204 aaKnown RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 ERFP50548 548 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 AGFG1P52594 562 aaKnown RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 DGCR6Q14129 220 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 FAM69AQ5T7M9 428 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 TTC33Q6PID6 262 aaPredicted RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 CLEC18BQ6UXF7 455 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 C9orf106Q8NAJ2 232 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 CLEC18CQ8NCF0 446 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 TMEM239Q8WW34 195 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 TAAR8Q969N4 342 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 SLCO4A1Q96BD0 722 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 DUS3LQ96G46 650 aaKnown RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 CCDC120Q96HB5 630 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 HS6ST2Q96MM7 605 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 ZNF347Q96SE7 839 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 EPYCQ99645 322 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 RNF122Q9H9V4 155 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 CCM2LQ9NUG4 571 aaPredicted RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 ERRFI1Q9UJM3 462 aaPredicted RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 MCTS1Q9ULC4 181 aaKnown RBP14.35□□□□□ -0.11
LRRC28-202ENST00000331450 SLC5A6Q9Y289 635 aa14.35□□□□□ -0.11
LRRC28-202ENST00000331450 ZNF814B7Z6K7 855 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 OR2T1O43869 369 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 SYNGR4O95473 234 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 BGLAPP02818 100 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 FPR1P21462 350 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 ACTR3P61158 418 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 SLC35A1P78382 337 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 ADORA2A-AS1P86434 159 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 LTBQ06643 244 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 SRSF1Q07955 248 aaKnown RBP eCLIP14.34□□□□□ -0.11
LRRC28-202ENST00000331450 GUSBP1Q15486 140 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 RIPPLY2Q5TAB7 128 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 ABLIM2Q6H8Q1 611 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 TMEM211Q6ICI0 200 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 NAXEQ8NCW5 288 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 SLC7A13Q8TCU3 470 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 ACOT11Q8WXI4 607 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-202ENST00000331450 RAB3IPQ96QF0 476 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-202ENST00000331450 TM9SF2Q99805 663 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 AURKCQ9UQB9 309 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 TESMINQ9Y4I5 508 aa14.34□□□□□ -0.11
LRRC28-202ENST00000331450 A0A087WUU8 490 aa14.33□□□□□ -0.12
LRRC28-202ENST00000331450 PIP5K1CO60331 668 aa14.33□□□□□ -0.12
LRRC28-202ENST00000331450 CYTIPO60759 359 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms