RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 H3F3CQ6NXT2 135 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.44■■□□□ 1.18
SOX1-201ENST00000330949 OR1S2Q8NGQ3 325 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 SYNPRQ8TBG9 265 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 SLC41A3Q96GZ6 507 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 MRI1Q9BV20 369 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 ZDHHC6Q9H6R6 413 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 MKL2Q9ULH7 1088 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 TMEM272A0A1B0GTI8 110 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 BSGP35613 385 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 CDK5R1Q15078 307 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 SLC8B1Q6J4K2 584 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 JMJD6Q6NYC1 403 aaPredicted RBP22.44■■□□□ 1.18
SOX1-201ENST00000330949 C3orf33Q6P1S2 294 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 GDF7Q7Z4P5 450 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 LRRTM4Q86VH4 590 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 C2orf15Q8WU43 125 aaKnown RBP22.44■■□□□ 1.18
SOX1-201ENST00000330949 PHYHIPQ92561 330 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 MEX3AA1L020 520 aaKnown RBP22.44■■□□□ 1.18
SOX1-201ENST00000330949 OR2F2O95006 317 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 BDKRB2P30411 391 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 RGS8P57771 180 aaPredicted RBP22.44■■□□□ 1.18
SOX1-201ENST00000330949 SREBF2Q12772 1141 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 PDZK1IP1Q13113 114 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 OR2F1Q13607 317 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.44■■□□□ 1.18
SOX1-201ENST00000330949 TRAV14DV4A0A0A6YYC5 116 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 BHLHE40O14503 412 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 SCAMP1O15126 338 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 BCL2L11O43521 198 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 SYN1P17600 705 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 SPI1P17947 270 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 SRMP19623 302 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 SNRPEP62304 92 aaKnown RBP22.43■■□□□ 1.18
SOX1-201ENST00000330949 LNX2Q8N448 690 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 ZNF461Q8TAF7 563 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 RSPH9Q9H1X1 276 aaPredicted RBP22.43■■□□□ 1.18
SOX1-201ENST00000330949 GLIPR2Q9H4G4 154 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 CMC2Q9NRP2 79 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 UNC119BA6NIH7 251 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 LMAN2Q12907 356 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 LASP1Q14847 261 aaKnown RBP22.43■■□□□ 1.18
SOX1-201ENST00000330949 TMEM150AQ86TG1 271 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 VRK2Q86Y07 508 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 OR6N1Q8NGY5 312 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 HAVCR1Q96D42 359 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 TCEAL7Q9BRU2 100 aa22.43■■□□□ 1.18
SOX1-201ENST00000330949 ZNF471Q9BX82 626 aaPredicted RBP22.43■■□□□ 1.18
SOX1-201ENST00000330949 PTHLHP12272 177 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 AKR1C2P52895 323 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 RPS11P62280 158 aaKnown RBP eCLIP22.42■■□□□ 1.18
SOX1-201ENST00000330949 AKR1C1Q04828 323 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 ILF3Q12906 894 aaKnown RBP eCLIP22.42■■□□□ 1.18
SOX1-201ENST00000330949 AMDHD1Q96NU7 426 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 MCHR1Q99705 422 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 WDR13Q9H1Z4 485 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 PRDM9Q9NQV7 894 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 CDK2P24941 298 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 PRLHRP49683 370 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 CMTM8Q8IZV2 173 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 OR9A1PQ8NGU1 263 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 SLC2A12Q8TD20 617 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 F2RL3Q96RI0 385 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 ASF1BQ9NVP2 202 aa22.42■■□□□ 1.18
SOX1-201ENST00000330949 SLC25A12O75746 678 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 AKR7A3O95154 331 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 TEAD1P28347 426 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 HCCSP53701 268 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 ECH1Q13011 328 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 RPE65Q16518 533 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 C4orf46Q504U0 113 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 FAM109BQ6ICB4 259 aaPredicted RBP22.41■■□□□ 1.18
SOX1-201ENST00000330949 PWWP2BQ6NUJ5 590 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 RASGEF1AQ8N9B8 481 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 CD180Q99467 661 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 C14orf105Q9NVL8 296 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 IMPA2O14732 288 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 PBLDP30039 288 aaPredicted RBP22.41■■□□□ 1.18
SOX1-201ENST00000330949 TAS2R20P59543 309 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 POU4F2Q12837 409 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 TP53I3Q53FA7 332 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 C12orf40Q86WS4 652 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 BEST3Q8N1M1 668 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 ZNF75AQ96N20 296 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 NTNG1Q9Y2I2 539 aa22.41■■□□□ 1.18
SOX1-201ENST00000330949 RBBP9O75884 186 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 THY1P04216 161 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 HMGN2P05204 90 aaKnown RBP22.4■■□□□ 1.18
SOX1-201ENST00000330949 PRR5P85299 388 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 PCGF3Q3KNV8 242 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 SSX6Q7RTT6 188 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 GLB1L2Q8IW92 636 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 ZNF433Q8N7K0 673 aaPredicted RBP22.4■■□□□ 1.18
SOX1-201ENST00000330949 OR4C16Q8NGL9 310 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 ANKRD10Q9NXR5 420 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 TAS2R8Q9NYW2 309 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 MIOXQ9UGB7 285 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 HTR3BO95264 441 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 SIRPAP78324 504 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 TGM3Q08188 693 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms