RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 ULK3Q6PHR2 472 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 PAQR6Q6TCH4 344 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 BEND4Q6ZU67 534 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 PIGWQ7Z7B1 504 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 TUSC5Q8IXB3 177 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 MICU2Q8IYU8 434 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 RNF217Q8TC41 542 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 DNAJA3Q96EY1 480 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 ZNF583Q96ND8 569 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 ALG2Q9H553 416 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 SPAG4Q9NPE6 437 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 CRIM1Q9NZV1 1036 aa13.21□□□□□ -0.29
CLRN1-203ENST00000328863 CACNA1DQ01668 2161 aa13.21□□□□□ -0.3
CLRN1-203ENST00000328863 TEX15Q9BXT5 2789 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 A0A0B4J2E0 115 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 A0A1B0GX12 115 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 GPR171O14626 319 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 GOSR1O95249 250 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 IMPDH2P12268 514 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 CD247P20963 164 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 PDK3Q15120 406 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 OR7A5Q15622 319 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 DUSP7Q16829 419 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 EXOC3L2Q2M3D2 409 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 C1orf140Q5VVS0 124 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 ZNF613Q6PF04 617 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 TFAP2EQ6VUC0 442 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 TMEM200AQ86VY9 491 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 SLC15A3Q8IY34 581 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 GPR32P1Q8NGA4 272 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 VANGL1Q8TAA9 524 aaPredicted RBP13.2□□□□□ -0.3
CLRN1-203ENST00000328863 SLC38A4Q969I6 547 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 SLC47A1Q96FL8 570 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 EPYCQ99645 322 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 MCHR1Q99705 422 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 PLSCR4Q9NRQ2 329 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 CMTM6Q9NX76 183 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 NDRG3Q9UGV2 375 aa13.2□□□□□ -0.3
CLRN1-203ENST00000328863 IGKV3D-15A0A087WSY6 115 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 SH3D21A4FU49 640 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 LIPT2A6NK58 231 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 NME4O00746 187 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 CHP2O43745 196 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 SHOX2O60902 331 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-203ENST00000328863 GCM2O75603 506 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-203ENST00000328863 PRF1P14222 555 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 FPR1P21462 350 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 CCKARP32238 428 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 UGT2B10P36537 528 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 SLC16A1P53985 500 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 LIPEQ05469 1076 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 BNIP2Q12982 314 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 SNTB1Q13884 538 aaKnown RBP13.19□□□□□ -0.3
CLRN1-203ENST00000328863 CEACAM7Q14002 265 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 OR1Q1Q15612 314 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 OTUD3Q5T2D3 398 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-203ENST00000328863 C8orf82Q6P1X6 216 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-203ENST00000328863 ZNF474Q6S9Z5 364 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-203ENST00000328863 GALNT5Q7Z7M9 940 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 ANKS4BQ8N8V4 417 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 ZNF610Q8N9Z0 462 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 OR6T1Q8NGN1 323 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 LZICQ8WZA0 190 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 ZNF300Q96RE9 604 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-203ENST00000328863 CCT8L2Q96SF2 557 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 KCTD14Q9BQ13 255 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-203ENST00000328863 MCCC2Q9HCC0 563 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 ADPRHL2Q9NX46 363 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 NDE1Q9NXR1 346 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 C6orf203Q9P0P8 240 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-203ENST00000328863 ABCD2Q9UBJ2 740 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 TAGLN3Q9UI15 199 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 USP22Q9UPT9 525 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 TESMINQ9Y4I5 508 aa13.19□□□□□ -0.3
CLRN1-203ENST00000328863 AQP7P3A6NL99 342 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 CPSF4LA6NMK7 179 aaKnown RBP13.18□□□□□ -0.3
CLRN1-203ENST00000328863 ZNF716A6NP11 495 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 C16orf97H3BN30 126 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 GSTA4O15217 222 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 OR2T1O43869 369 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 NPIPB7O75200 414 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 KLK2P20151 261 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 CRYBA2P53672 197 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 PSME3P61289 254 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 FAM27E3Q08E93 113 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 ENTPD8Q5MY95 495 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 FAM69AQ5T7M9 428 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 ZNF295-AS1Q8N0V1 137 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 CCDC197Q8NCU1 140 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 MFSD8Q8NHS3 518 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 DACH2Q96NX9 599 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 MED18Q9BUE0 208 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 RSPO3Q9BXY4 272 aaPredicted RBP13.18□□□□□ -0.3
CLRN1-203ENST00000328863 ING1Q9UK53 422 aaPredicted RBP13.18□□□□□ -0.3
CLRN1-203ENST00000328863 NOSIPQ9Y314 301 aaKnown RBP13.18□□□□□ -0.3
CLRN1-203ENST00000328863 CELSR2Q9HCU4 2923 aa13.18□□□□□ -0.3
CLRN1-203ENST00000328863 TRAV36DV7A0A075B6V5 113 aa13.17□□□□□ -0.3
CLRN1-203ENST00000328863 A0A087WUJ7 227 aa13.17□□□□□ -0.3
CLRN1-203ENST00000328863 VAMP5O95183 116 aa13.17□□□□□ -0.3
CLRN1-203ENST00000328863 CNOT4O95628 575 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms