RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 C9orf43Q8TAL5 461 aaPredicted RBP17.05■□□□□ 0.32
EXOSC3-201ENST00000327304 RNF217Q8TC41 542 aa17.05■□□□□ 0.32
EXOSC3-201ENST00000327304 DNAJA4Q8WW22 397 aaPredicted RBP17.05■□□□□ 0.32
EXOSC3-201ENST00000327304 C12orf43Q96C57 262 aaKnown RBP17.05■□□□□ 0.32
EXOSC3-201ENST00000327304 TSSK6Q9BXA6 273 aa17.05■□□□□ 0.32
EXOSC3-201ENST00000327304 LAT2Q9GZY6 243 aa17.05■□□□□ 0.32
EXOSC3-201ENST00000327304 RPL36Q9Y3U8 105 aaKnown RBP17.05■□□□□ 0.32
EXOSC3-201ENST00000327304 WIF1Q9Y5W5 379 aa17.05■□□□□ 0.32
EXOSC3-201ENST00000327304 PTPRQQ9UMZ3 2332 aa17.05■□□□□ 0.32
EXOSC3-201ENST00000327304 CDC42EP2O14613 210 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 PRKYO43930 277 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 IFI30P13284 250 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 CCR4P51679 360 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 COPZ1P61923 177 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 ST3GAL4Q11206 333 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 OR1C1Q15619 314 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 LSRQ86X29 649 aaPredicted RBP17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 PSD4Q8NDX1 1056 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 PFN4Q8NHR9 129 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 RAB2BQ8WUD1 216 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 BPIFA2Q96DR5 249 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 ANGPTL4Q9BY76 406 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 MED17Q9NVC6 651 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 SELENONQ9NZV5 590 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 HEATR5AQ86XA9 2040 aa17.04■□□□□ 0.32
EXOSC3-201ENST00000327304 A0A0G2JMM0 328 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 A0A1W2PPB8 328 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 A0A1W2PRS3 328 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 TRIM64BA6NI03 449 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 KIR3DP1A8MWS1 328 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 H3BMQ9 156 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 TLX2O43763 284 aaPredicted RBP17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 EIF4E2O60573 245 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 ENDOUP21128 410 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 C21orf33P30042 268 aaPredicted RBP17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 TMPRSS3P57727 454 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 SNTA1Q13424 505 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 LSAMPQ13449 338 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 INPP5JQ15735 1006 aaPredicted RBP17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 SNAPC1Q16533 368 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 MISPQ8IVT2 679 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 TMEM163Q8TC26 289 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 NTNG2Q96CW9 530 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 COG8Q96MW5 612 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 CDCA4Q9BXL8 241 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 MEPEQ9NQ76 525 aaPredicted RBP17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 C20orf141Q9NUB4 165 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 MGAQ8IWI9 3026 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 A0A087WV48 116 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 OR5H15A6NDH6 313 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 STSP08842 583 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 MAKP20794 623 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 UCNP55089 124 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 C17orf67Q0P5P2 114 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 IRF3Q14653 427 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 SLC30A6Q6NXT4 461 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 CADM2Q8N3J6 435 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 OR2T33Q8NG76 320 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 CRELD1Q96HD1 420 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 BCL7BQ9BQE9 202 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 SACM1LQ9NTJ5 587 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 DNAJC27Q9NZQ0 273 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 PPP4R1LQ9P1A2 415 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 WARS2Q9UGM6 360 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 ICAM5Q9UMF0 924 aa17.03■□□□□ 0.32
EXOSC3-201ENST00000327304 HTR3EA5X5Y0 456 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 SNTNA6NMZ2 147 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 AHCYL1O43865 530 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 SLC25A12O75746 678 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 RCBTB2O95199 551 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 P04436 131 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 HMGN1P05114 100 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 TMEM44Q2T9K0 475 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 COL28A1Q2UY09 1125 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 PGGHGQ32M88 737 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 SYT14P1Q58G82 188 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 ANKRD13BQ86YJ7 626 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 SLC43A2Q8N370 569 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 B4GALNT2Q8NHY0 566 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 ZNF524Q96C55 264 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 LRR1Q96L50 414 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 FRMD6Q96NE9 622 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 FUNDC2Q9BWH2 189 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 HES7Q9BYE0 225 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 RNF32Q9H0A6 362 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 TIMMDC1Q9NPL8 285 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 MED11Q9P086 117 aa17.02■□□□□ 0.31
EXOSC3-201ENST00000327304 A0A087WUJ7 227 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 ANKRD33BA6NCL7 494 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 DBTP11182 482 aaKnown RBP17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 BMP7P18075 431 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 PCSK6P29122 969 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 DNASE1L1P49184 302 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 WBP2NLQ6ICG8 309 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 IGFL2Q6UWQ7 119 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 MDS2Q8NDY4 140 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 OR52L1Q8NGH7 329 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 OR4Q3Q8NH05 313 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 OR5W2Q8NH69 310 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 HAS2Q92819 552 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms