RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 C5AR1P21730 350 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 OMGP23515 440 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 C18orf21Q32NC0 220 aaPredicted RBP15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 GLYR1Q49A26 553 aaPredicted RBP15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 DEFB119Q8N690 84 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 KDM1BQ8NB78 822 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 SEMA6DQ8NFY4 1073 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 OR7G3Q8NG95 312 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 IGSF8Q969P0 613 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 ACPTQ9BZG2 426 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 ENKD1Q9H0I2 346 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 ZCCHC4Q9H5U6 513 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 C11orf49Q9H6J7 331 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 APOBEC3BQ9UH17 382 aaKnown RBP15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 C5P01031 1676 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 TP53BP1Q12888 1972 aaPredicted RBP15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 TRAV27A0A087WT01 109 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 SLC2A1P11166 492 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 AKR1C1Q04828 323 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 PGGHGQ32M88 737 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 PLK5Q496M5 336 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 VASNQ6EMK4 673 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 FAM122BQ7Z309 247 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 OR8J2Q8NGG1 315 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 VAPAQ9P0L0 249 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 TM4SF1P30408 202 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 SLC51BQ86UW2 128 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 IL17FQ96PD4 163 aa15.79■□□□□ 0.12
SMCHD1-201ENST00000320876 PHIPQ8WWQ0 1821 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 JUNDP17535 347 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 FAM189BP81408 668 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 HHEXQ03014 270 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 ENTPD8Q5MY95 495 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 FAM111BQ6SJ93 734 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 OR4F15Q8NGB8 312 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 PKMYT1Q99640 499 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 CMSS1Q9BQ75 279 aaKnown RBP15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 MCTS1Q9ULC4 181 aaKnown RBP15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 GABARAPH6UMI1 98 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 ADAMTS4O75173 837 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 GLSO94925 669 aaPredicted RBP15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 GABARAPO95166 117 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 CHRNB4P30926 498 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 HNF4GQ14541 408 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 OR7A5Q15622 319 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 STEAP3Q658P3 488 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 ZNF582Q96NG8 517 aaPredicted RBP15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 PTHP01270 115 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 ACRP10323 421 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 HTRA4P83105 476 aaPredicted RBP15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 C17orf105B2RV13 164 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 GPRIN2O60269 458 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 ANXA7P20073 488 aaKnown RBP15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 ARL16Q0P5N6 197 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 AADACL3Q5VUY0 350 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 SHEQ5VZ18 495 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 EID2Q8N6I1 236 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 NPWQ8N729 165 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 RAB3CQ96E17 227 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 NKX6-2Q9C056 277 aaPredicted RBP15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 NXF5Q9H1B4 397 aaKnown RBP15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 H7C1Q1 480 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 NUDT21O43809 227 aaKnown RBP15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 SLC43A1O75387 559 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 TMEM31Q5JXX7 168 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 IL22RA1Q8N6P7 574 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 OR10R2Q8NGX6 335 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 CD200R1Q8TD46 325 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 LPAR4Q99677 370 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 VPS25Q9BRG1 176 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 BAXQ07812 192 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 PHYHD1Q5SRE7 291 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 LMO3Q8TAP4 145 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 DUSP19Q8WTR2 217 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 DBHP09172 617 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 C3orf38Q5JPI3 329 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 PDZD3Q86UT5 571 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 DMBX1Q8NFW5 382 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 UBXN10Q96LJ8 280 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 OR52D1Q9H346 318 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 GPR45Q9Y5Y3 372 aa15.78■□□□□ 0.12
SMCHD1-201ENST00000320876 OR2C1O95371 312 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 AHRP35869 848 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 SLC11A1P49279 550 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 TPMTP51580 245 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 ARSDP51689 593 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 NTMT1Q9BV86 223 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 SLC6A20Q9NP91 592 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 PRSS44E7EML9 344 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 LALBAP00709 142 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 NDUFA6P56556 154 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 PODNL1Q6PEZ8 512 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 CPNE4Q96A23 557 aaPredicted RBP15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 TMEM59Q9BXS4 323 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 CKAP5Q14008 2032 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 TMEM269A0A1B0GVZ9 245 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 FABP7O15540 132 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 PFKMP08237 780 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 HPSE2Q8WWQ2 592 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 MARC2Q969Z3 335 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms