RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 EMC3Q9P0I2 261 aa13.72□□□□□ -0.21
FOXR1-201ENST00000317011 ARMCX1Q9P291 453 aa13.72□□□□□ -0.21
FOXR1-201ENST00000317011 TMED7Q9Y3B3 224 aa13.72□□□□□ -0.21
FOXR1-201ENST00000317011 DSPPQ9NZW4 1301 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 TMEM72A0PK05 275 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 OR5H1A6NKK0 313 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 SHISA9B4DS77 424 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 EIF1BO60739 113 aaKnown RBP13.71□□□□□ -0.21
FOXR1-201ENST00000317011 CCDC22O60826 627 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 SLC22A3O75751 556 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 DBIP07108 87 aaKnown RBP13.71□□□□□ -0.21
FOXR1-201ENST00000317011 TFPIP10646 304 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 GGT1P19440 569 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 ACAA2P42765 397 aaKnown RBP13.71□□□□□ -0.21
FOXR1-201ENST00000317011 POLR2HP52434 150 aaKnown RBP13.71□□□□□ -0.21
FOXR1-201ENST00000317011 ATP5J2P56134 94 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 RPS4XP62701 263 aaKnown RBP13.71□□□□□ -0.21
FOXR1-201ENST00000317011 DNM1P46Q6ZS02 220 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 MSANTD1Q6ZTZ1 278 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 ZNF100Q8IYN0 542 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 PIGXQ8TBF5 258 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 FBXW5Q969U6 566 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 BOD1Q96IK1 185 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 ZBTB18Q99592 522 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 AMBRA1Q9C0C7 1298 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 NPAP1Q9NZP6 1156 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 MALT1Q9UDY8 824 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 NOSIPQ9Y314 301 aaKnown RBP13.71□□□□□ -0.21
FOXR1-201ENST00000317011 CHST2Q9Y4C5 530 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 SLC25A15Q9Y619 301 aa13.71□□□□□ -0.21
FOXR1-201ENST00000317011 HIVEP2P31629 2446 aa13.71□□□□□ -0.22
FOXR1-201ENST00000317011 CDHR4A6H8M9 788 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 CFAP73A6NFT4 308 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 RFXANKO14593 260 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 DCTN3O75935 186 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 NR2F1P10589 423 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 IL7RP16871 459 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 TACR3P29371 465 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 MRPL19P49406 292 aaKnown RBP13.7□□□□□ -0.22
FOXR1-201ENST00000317011 SLC35A1P78382 337 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 IRX1P78414 480 aaPredicted RBP13.7□□□□□ -0.22
FOXR1-201ENST00000317011 HPCAP84074 193 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 SLC17A1Q14916 467 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 AGKQ53H12 422 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 MRPL2Q5T653 305 aaKnown RBP13.7□□□□□ -0.22
FOXR1-201ENST00000317011 ALKBH2Q6NS38 261 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.7□□□□□ -0.22
FOXR1-201ENST00000317011 DTX2Q86UW9 622 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 ZNF440Q8IYI8 595 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 ANKS4BQ8N8V4 417 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 SLC38A5Q8WUX1 472 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 APH1AQ96BI3 265 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 MUCL1Q96DR8 90 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 ZHX1-C8orf76Q96EF9 292 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 RADILQ96JH8 1075 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 PIF1Q9H611 641 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 CCDC167Q9P0B6 97 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 JMJD1CQ15652 2540 aa13.7□□□□□ -0.22
FOXR1-201ENST00000317011 ZC3H12DA2A288 527 aaKnown RBP13.69□□□□□ -0.22
FOXR1-201ENST00000317011 NR5A2O00482 541 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 CLOCKO15516 846 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 MRPL33O75394 65 aaKnown RBP13.69□□□□□ -0.22
FOXR1-201ENST00000317011 FOXG1P55316 489 aaPredicted RBP13.69□□□□□ -0.22
FOXR1-201ENST00000317011 OR2B6P58173 313 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 TNK1Q13470 666 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 GNA13Q14344 377 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 ETFDHQ16134 617 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 GABRA6Q16445 453 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 ZSWIM7Q19AV6 140 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 C1QTNF12Q5T7M4 302 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 PAQR6Q6TCH4 344 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 PEX5LQ8IYB4 626 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 ZIC4Q8N9L1 334 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 WDR31Q8NA23 367 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 KBTBD8Q8NFY9 601 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 WDR60Q8WVS4 1066 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 DDIT4LQ96D03 193 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 TRAF4Q9BUZ4 470 aaPredicted RBP13.69□□□□□ -0.22
FOXR1-201ENST00000317011 TPT1P8Q9HAU6 139 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 RLIMQ9NVW2 624 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 PARPBPQ9NWS1 579 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 ASB6Q9NWX5 421 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 TAS2R16Q9NYV7 291 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 CISD1Q9NZ45 108 aaKnown RBP13.69□□□□□ -0.22
FOXR1-201ENST00000317011 CALML5Q9NZT1 146 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 MAGED1Q9Y5V3 778 aaPredicted RBP13.69□□□□□ -0.22
FOXR1-201ENST00000317011 FLVCR1Q9Y5Y0 555 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 CAPN7Q9Y6W3 813 aa13.69□□□□□ -0.22
FOXR1-201ENST00000317011 FAM234BA2RU67 622 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
FOXR1-201ENST00000317011 NPIPB7O75200 414 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 ITGA5P08648 1049 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 BMP2P12643 396 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 ETFAP13804 333 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 HOXB9P17482 250 aaPredicted RBP13.68□□□□□ -0.22
FOXR1-201ENST00000317011 CCNA2P20248 432 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 P2RY4P51582 365 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 POLR2JP52435 117 aaKnown RBP13.68□□□□□ -0.22
FOXR1-201ENST00000317011 KRTAP1-1Q07627 177 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 KLF10Q13118 480 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms