RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 LIMS3P0CW19 117 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 LIMS4P0CW20 117 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 HPGDP15428 266 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 HOXB6P17509 224 aaKnown RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 ELK1P19419 428 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 ENDOUP21128 410 aaKnown RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 GPR3P46089 330 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 OMPP47874 163 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 ILKQ13418 452 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 TRAM2Q15035 370 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 TOR2AQ5JU69 321 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 C12orf73Q69YU5 71 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 OGFOD3Q6PK18 319 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 APOOLQ6UXV4 268 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 RPTNQ6XPR3 784 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 SLC36A4Q6YBV0 504 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 OR51G2Q8NGK0 314 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 OR13C5Q8NGS8 318 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 FAM174AQ8TBP5 190 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 ZFAND1Q8TCF1 268 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 PMEPA1Q969W9 287 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 ORAI1Q96D31 301 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 VSTM2LQ96N03 204 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 FUZQ9BT04 418 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 CCDC86Q9H6F5 360 aaKnown RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 NUDT15Q9NV35 164 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 CNOT1A5YKK6 2376 aaKnown RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 LRP4O75096 1905 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 LILRA5A6NI73 299 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 OIP5O43482 229 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 DPM1O60762 260 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 NOS1APO75052 506 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 CXCL3P19876 107 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 PRKAR1BP31321 381 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 ARFIP1P53367 373 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 CTAG1AP78358 180 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 MRPL28Q13084 256 aaKnown RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 CD226Q15762 336 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 KLHL12Q53G59 568 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 TRIM61Q5EBN2 209 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 MANEAQ5SRI9 462 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 LCN10Q6JVE6 187 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 PWWP2BQ6NUJ5 590 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 C1orf94Q6P1W5 598 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 THSD4Q6ZMP0 1018 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 BPHLQ86WA6 291 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 C17orf82Q86X59 251 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 FAM109AQ8N4B1 249 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 BCORP1Q8N888 145 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 OR4Q3Q8NH05 313 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 TEX47Q8TBZ9 253 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 SPRYD4Q8WW59 207 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 UFD1Q92890 307 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 ARHGDIGQ99819 225 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 HCAR1Q9BXC0 346 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 RNF32Q9H0A6 362 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 MEPEQ9NQ76 525 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 DUSP22Q9NRW4 184 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 CALML5Q9NZT1 146 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 SPEF1Q9Y4P9 236 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 H3BSH0 61 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 I3L521 148 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 GABRPO00591 440 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 NUDT14O95848 222 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CSTAP01040 98 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CD3GP09693 182 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 DRD5P21918 477 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 NUDT1P36639 197 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 GCGRP47871 477 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 MTNR1AP48039 350 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 NR0B1P51843 470 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CDH11P55287 796 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 FGFBP1Q14512 234 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ALG10BQ5I7T1 473 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SLC27A4Q6P1M0 643 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 PLBD1Q6P4A8 553 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CCDC28AQ8IWP9 274 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 MAML2Q8IZL2 1156 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 OR11H4Q8NGC9 324 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 PHOSPHO1Q8TCT1 267 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 EDAQ92838 391 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ZFP3Q96NJ6 502 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SECISBP2Q96T21 854 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ATF6BQ99941 703 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 PRSS27Q9BQR3 290 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 OR51V1Q9H2C8 321 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ZNF304Q9HCX3 659 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 Q9N2J8 555 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 LANCL2Q9NS86 450 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SERTAD3Q9UJW9 196 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CBLCQ9ULV8 474 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SIRT4Q9Y6E7 314 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 A0A0A6YYJ9 748 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 A0A1B0GWA3 101 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 FAM171A2A8MVW0 826 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 MPZL2O60487 215 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 REM1O75628 298 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 IL1AP01583 271 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 DBIP07108 87 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ZGLP1P0C6A0 271 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms