RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 BHLHE22Q8NFJ8 381 aaPredicted RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 CHAC2Q8WUX2 184 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 RND1Q92730 232 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 INTS12Q96CB8 462 aaKnown RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 CCDC124Q96CT7 223 aaKnown RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 HSH2DQ96JZ2 352 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ZNF559Q9BR84 538 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 PRRG4Q9BZD6 226 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 UCK2Q9BZX2 261 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ADAM19Q9H013 955 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 TMEM27Q9HBJ8 222 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ADPRHL2Q9NX46 363 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 NDE1Q9NXR1 346 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CLCF1Q9UBD9 225 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 TESQ9UGI8 421 aaKnown RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 NKX2-6A6NCS4 301 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CD8B2A6NJW9 211 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ELOA3DA6NLF2 546 aaPredicted RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 GJE1A6NN92 205 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 BOLA2-SMG1P6H3BVE0 249 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 J3KTA2 159 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ARPC2O15144 300 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ADAMDEC1O15204 470 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 SYNGR4O95473 234 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 F12P00748 615 aaPredicted RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 IFNA14P01570 189 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 IL2RAP01589 272 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 THY1P04216 161 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 C8BP07358 591 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 HOXD4P09016 255 aaPredicted RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 IMPDH2P12268 514 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ATP6V1B2P21281 511 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 FUT4P22083 530 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CBLP22681 906 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 HTR1EP28566 365 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 PTGER4P35408 488 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 SMSP52788 366 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CDH12P55289 794 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 DLX5P56178 289 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 OR2B6P58173 313 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 MYBPHQ13203 477 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ELOA3BQ3SY89 546 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ALG10BQ5I7T1 473 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ENTPD8Q5MY95 495 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 HIST2H2BCQ6DN03 193 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CCBE1Q6UXH8 406 aaPredicted RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 FKBP9P1Q75LS8 142 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CBLL1Q75N03 491 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ADGRE4PQ86SQ3 457 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ATG4DQ86TL0 474 aaPredicted RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 LIX1LQ8IVB5 337 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 PLPP7Q8NBV4 271 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ELOA3Q8NG57 546 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 PHF10Q8WUB8 498 aaKnown RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 SLC7A6OSQ96CW6 309 aaPredicted RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 THTPAQ9BU02 230 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 TRIM2Q9C040 744 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CALHM2Q9HA72 323 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 STOML1Q9UBI4 398 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 BAG5Q9UL15 447 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 SLC9A8Q9Y2E8 581 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 SNX13Q9Y5W8 968 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 SPIN1Q9Y657 262 aaPredicted RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 LRRK2Q5S007 2527 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 DIDO1Q9BTC0 2240 aaKnown RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 IGKV1D-42A0A075B6H8 117 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 A0A0B4J2E0 115 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 A0A1B0GX12 115 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 MBD3L4A6NDZ8 208 aaPredicted RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 MBD3L3A6NE82 208 aaPredicted RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 MBD3L5A6NJ08 208 aaPredicted RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 FAM25EA8MYX2 175 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 ZNF814B7Z6K7 855 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 SULT2B1O00204 365 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 KPNA4O00629 521 aaPredicted RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 SMAD9O15198 467 aaKnown RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 GYG2O15488 501 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 RAMP1O60894 148 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 GMNNO75496 209 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 PRKD3O94806 890 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 LYPD3O95274 346 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 TMIGD3P0DMS9 266 aaPredicted RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 BMP5P22003 454 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 CEACAM8P31997 349 aaPredicted RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 RPS5P46782 204 aaKnown RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 DIO1P49895 249 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 ERFP50548 548 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 SELENOWP63302 87 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 MS4A2Q01362 244 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 BNIP1Q12981 228 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 PIN1Q13526 163 aaPredicted RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 SF3B4Q15427 424 aaKnown RBP eCLIP7.03□□□□□ -1.283e-6■■■□□ 19.1
CDC42-201ENST00000315554 OR7A5Q15622 319 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 ZNF239Q16600 458 aaKnown RBP7.03□□□□□ -1.28
CDC42-201ENST00000315554 LINC01559Q495D7 138 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 IFI44LQ53G44 452 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 RIPPLY2Q5TAB7 128 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 C1orf140Q5VVS0 124 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 MZT2BQ6NZ67 158 aa7.03□□□□□ -1.28
CDC42-201ENST00000315554 MTFR2Q6P444 385 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms