RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 GABRR2P28476 465 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 HBG1P69891 147 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 MANEAQ5SRI9 462 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 WDR31Q8NA23 367 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 IL31RAQ8NI17 732 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 WFIKKN2Q8TEU8 576 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 HDAC7Q8WUI4 952 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 BCL7CQ8WUZ0 217 aaPredicted RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 THAP4Q8WY91 577 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 P2RY13Q9BPV8 354 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 FAM124BQ9H5Z6 455 aaPredicted RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 CPNE7Q9UBL6 633 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 FBXL4Q9UKA2 621 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 CYSLTR1Q9Y271 337 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 CACNG2Q9Y698 323 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 A3GALT2U3KPV4 340 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 TBC1D3BA6NDS4 549 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 GLI1P08151 1106 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 SYPP08247 313 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 DBHP09172 617 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 ERVPABLB-1P60509 514 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 BST1Q10588 318 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 LAPTM4AQ15012 233 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 JOSD1Q15040 202 aaPredicted RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 RTP2Q5QGT7 225 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 ZBTB37Q5TC79 503 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 MFSD14CQ5VZR4 134 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 WDR88Q6ZMY6 472 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF534Q76KX8 674 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 TXNRD3Q86VQ6 643 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 SCML4Q8N228 414 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 OR5W2Q8NH69 310 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 EID2BQ96D98 161 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 SEC22AQ96IW7 307 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 NICN1Q9BSH3 213 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 TXNIPQ9H3M7 391 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 METTL1Q9UBP6 276 aaKnown RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 SSU72P8A0A1W2PR75 194 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 SOWAHBA6NEL2 793 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 LYRM1O43325 122 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 SNX3O60493 162 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 THBS4P35443 961 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 MCAMP43121 646 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 GABARAPL2P60520 117 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 SP3Q02447 781 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 PMS2P3Q13401 168 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 LEXMQ3ZCV2 418 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 EARS2Q5JPH6 523 aaKnown RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 KIAA0895LQ68EN5 471 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 CLEC6AQ6EIG7 209 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 C3orf67Q6ZVT6 689 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 FITM2Q8N6M3 262 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 GPRC5AQ8NFJ5 357 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 OR5AU1Q8NGC0 362 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF502Q8TBZ5 544 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 COPS9Q8WXC6 57 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 SLC35E1Q96K37 410 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 HHIPQ96QV1 700 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 MROQ9BYG7 248 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 ARHGAP39Q9C0H5 1083 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 FBXL15Q9H469 300 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 HMX1Q9NP08 348 aaPredicted RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 C2orf42Q9NWW7 574 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 IRAK2O43187 625 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 XRCC2O43543 280 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 SEMA7AO75326 666 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 LTKP29376 864 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 MC5RP33032 325 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 CXCR3P49682 368 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 EFNA5P52803 228 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 GLB1LQ6UWU2 654 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 BTNL3Q6UXE8 466 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 OR8A1Q8NGG7 326 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 CWH43Q9H720 699 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 TAS2R14Q9NYV8 317 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 PSG11Q9UQ72 335 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 HS3ST4Q9Y661 456 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 VSTM2BA6NLU5 285 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 NEURL1BA8MQ27 555 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 CYR61O00622 381 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 SCDO00767 359 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 TP53I11O14683 189 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 CYB5R3P00387 301 aaPredicted RBP7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 GYPCP04921 128 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 PIRTP0C851 137 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 GZMKP49863 264 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 FAM3AP98173 230 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 EIF4HQ15056 248 aaKnown RBP7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 Q56UQ5 140 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 NT5DC1Q5TFE4 455 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 OR5M10Q6IEU7 315 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 PTRH1Q86Y79 214 aaKnown RBP7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 CHDHQ8NE62 594 aaPredicted RBP7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 HUS1BQ8NHY5 278 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 DCAF5Q96JK2 942 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 NELL2Q99435 816 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 MRIQ9BWK5 157 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 POLDIP3Q9BY77 421 aaKnown RBP7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 ACER3Q9NUN7 267 aa7.16□□□□□ -1.26
LIMCH1-201ENST00000313860 UFC1Q9Y3C8 167 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms