RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ZNF35P13682 527 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 TACR3P29371 465 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 GABRA3P34903 492 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 ARSDP51689 593 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 FGL2Q14314 439 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 ARHGAP40Q5TG30 622 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 GALNTL5Q7Z4T8 443 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 STPG2Q8N412 459 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 RLIMQ9NVW2 624 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 TET1Q8NFU7 2136 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 SOX14O95416 240 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 ACP5P13686 325 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 TLE2Q04725 743 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 ACOT4Q8N9L9 421 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 POM121Q96HA1 1249 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 METTL7AQ9H8H3 244 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 LHX3Q9UBR4 397 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 ENPP3O14638 875 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 USF2Q15853 346 aaPredicted RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 EML3Q32P44 896 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 UEVLDQ8IX04 471 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 NRMQ8IXM6 262 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 TSTD1Q8NFU3 115 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ARRDC2Q8TBH0 407 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SLC38A5Q8WUX1 472 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 MYLIPQ8WY64 445 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 NDRG1Q92597 394 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 BORCS7Q96B45 105 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SLC6A18Q96N87 628 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 STEAP1Q9UHE8 339 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 BLOC1S5-TXNDC5H3BN57 136 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 GFYI3L273 518 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 LCKP06239 509 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 DGKEP52429 567 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SORDQ00796 357 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ACSM1Q08AH1 577 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 PLCXD2Q0VAA5 305 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 CLPPQ16740 277 aaPredicted RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 DEGS2Q6QHC5 323 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 LSMEM2Q8N112 164 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ARRDC1Q8N5I2 433 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SGPP1Q9BX95 441 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 FKRPQ9H9S5 495 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 C7orf72A4D263 438 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF705EA8MWA4 302 aaPredicted RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SBK2P0C263 348 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 PREPP48147 710 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 KIAA1024LP59773 190 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ZC3H14Q6PJT7 736 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 OR5AK3PQ8NH89 298 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 NSUN5Q96P11 429 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 CHST6Q9GZX3 395 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 WASH6PQ9NQA3 447 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 C6P13671 934 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 RAB6AP20340 208 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SLC11A1P49279 550 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 TMEM201Q5SNT2 666 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ZBTB37Q5TC79 503 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SAXO2Q658L1 398 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 CIR1Q86X95 450 aaPredicted RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 OR6N2Q8NGY6 317 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 C3orf49Q96BT1 292 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 OR52D1Q9H346 318 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF304Q9HCX3 659 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ACTR10Q9NZ32 417 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 RBMX2Q9Y388 322 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 POLEQ07864 2286 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 TANC1Q9C0D5 1861 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 CTDSPLO15194 276 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SYT7O43581 403 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 BRINP1O60477 761 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ADRB1P08588 477 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 GLULP15104 373 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ZP3P21754 424 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 NTSR1P30989 418 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SSX1Q16384 188 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 CLLU1Q5K131 121 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 AVPI1Q5T686 147 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 LIMS2Q7Z4I7 341 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 TECPR1Q7Z6L1 1165 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 CPOQ8IVL8 374 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 RIMKLAQ8IXN7 391 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ENTHD1Q8IYW4 607 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 PXT1Q8NFP0 134 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 OR6N1Q8NGY5 312 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 RBMXL1Q96E39 390 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 GAL3ST4Q96RP7 486 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 IER2Q9BTL4 223 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 IKZF4Q9H2S9 585 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 TMEM165Q9HC07 324 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 FBRSL1Q9HCM7 1045 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 F6UZH7 168 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 TRIM77I1YAP6 450 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SLC35E2P0CK97 266 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 TACR1P25103 407 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 DUSP8Q13202 625 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 OTOP2Q7RTS6 562 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SUMF2Q8NBJ7 301 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 GRHL3Q8TE85 626 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms