RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 COPZ1P61923 177 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 RBBP4Q09028 425 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 RASGEF1BQ0VAM2 473 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 PIN1Q13526 163 aaPredicted RBP10.7□□□□□ -0.7
SCFD1-201ENST00000311943 NRF1Q16656 503 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 ALG10BQ5I7T1 473 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 TSEN54Q7Z6J9 526 aaKnown RBP10.7□□□□□ -0.7
SCFD1-201ENST00000311943 PMM1Q92871 262 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 MOGAT1Q96PD6 335 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF385AQ96PM9 386 aaKnown RBP10.7□□□□□ -0.7
SCFD1-201ENST00000311943 PCDHAC1Q9H158 963 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 TMEM181Q9P2C4 612 aa10.7□□□□□ -0.7
SCFD1-201ENST00000311943 VPS13CQ709C8 3753 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 ALPK2Q86TB3 2170 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 LIPT2A6NK58 231 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 CYTIPO60759 359 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 SERPINB7O75635 380 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 FUT1P19526 365 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 P2RY4P51582 365 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 H3F3AP84243 136 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 SF3B4Q15427 424 aaKnown RBP eCLIP10.69□□□□□ -0.72e-7■■■□□ 18
SCFD1-201ENST00000311943 CYBRD1Q53TN4 286 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 C9orf135Q5VTT2 229 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 C1orf140Q5VVS0 124 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 DEF8Q6ZN54 512 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 RINLQ6ZS11 566 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 CCDC80Q76M96 950 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 CARM1Q86X55 608 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 NKAIN4Q8IVV8 208 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 LRRC17Q8N6Y2 441 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 SLC26A7Q8TE54 656 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 ADAMTS16Q8TE57 1224 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 OIT3Q8WWZ8 545 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 GMPPAQ96IJ6 420 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-201ENST00000311943 WFIKKN1Q96NZ8 548 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 KLHL4Q9C0H6 718 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 ALG2Q9H553 416 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 ADA2Q9NZK5 511 aa10.69□□□□□ -0.7
SCFD1-201ENST00000311943 C6orf203Q9P0P8 240 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-201ENST00000311943 A0A0B4J2E0 115 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 A0A1B0GX12 115 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 GJE1A6NN92 205 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 FTCDNL1E5RQL4 147 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 PRKD3O94806 890 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 IL18BPO95998 194 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 HLA-DOBP13765 273 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 CTBP2P56545 445 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 TLE4Q04727 773 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 OR2A2Q6IF42 318 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 TFAP2EQ6VUC0 442 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 LSMEM1Q8N8F7 131 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 DTNBP1Q96EV8 351 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 PLSCR4Q9NRQ2 329 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 SLC7A7Q9UM01 511 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 PROCRQ9UNN8 238 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 CELSR1Q9NYQ6 3014 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 A0A1W2PR80 420 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 ELOA3DA6NLF2 546 aaPredicted RBP10.68□□□□□ -0.7
SCFD1-201ENST00000311943 CXCR6O00574 342 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 PMS2P2O95744 297 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 NPPAP01160 153 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 KIR2DL3P43628 341 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 ELOA3BQ3SY89 546 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 FBXL19-AS1Q494R0 122 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 OTUD3Q5T2D3 398 aaPredicted RBP10.68□□□□□ -0.7
SCFD1-201ENST00000311943 ABLIM2Q6H8Q1 611 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 STAC2Q6ZMT1 411 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 GPAT4Q86UL3 456 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF440Q8IYI8 595 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 ZIC4Q8N9L1 334 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 ELOA3Q8NG57 546 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 DDIT4LQ96D03 193 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 CMTM5Q96DZ9 223 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 SH3GL1Q99961 368 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 SPOCK3Q9BQ16 436 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 PRSS27Q9BQR3 290 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 SPATA5L1Q9BVQ7 753 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 CACYBPQ9HB71 228 aaKnown RBP10.68□□□□□ -0.7
SCFD1-201ENST00000311943 STOML1Q9UBI4 398 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 ABCD2Q9UBJ2 740 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 TAGLN3Q9UI15 199 aa10.68□□□□□ -0.7
SCFD1-201ENST00000311943 A8MVM7 634 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 MSTNO14793 375 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 FFAR1O14842 300 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF208O43345 1280 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 DIRAS1O95057 198 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF682O95780 498 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 SERPINA1P01009 418 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 YES1P07947 543 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 PNMTP11086 282 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 IDUAP35475 653 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 PDSS1Q5T2R2 415 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 GDF7Q7Z4P5 450 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 PATL1Q86TB9 770 aaKnown RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 CXorf67Q86X51 503 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 PFN4Q8NHR9 129 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 BCAS4Q8TDM0 211 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 SLC25A43Q8WUT9 341 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 TMEM255BQ8WV15 326 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 SLC38A4Q969I6 547 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms