RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 ZSWIM7Q19AV6 140 aa14.42□□□□□ -0.1
LSM1-201ENST00000311351 GLIPR1L2Q4G1C9 344 aa14.42□□□□□ -0.1
LSM1-201ENST00000311351 CGB2Q6NT52 195 aa14.42□□□□□ -0.1
LSM1-201ENST00000311351 REEP3Q6NUK4 255 aa14.42□□□□□ -0.1
LSM1-201ENST00000311351 ZNF704Q6ZNC4 412 aaPredicted RBP14.42□□□□□ -0.1
LSM1-201ENST00000311351 ATG4DQ86TL0 474 aaPredicted RBP14.42□□□□□ -0.1
LSM1-201ENST00000311351 SIKE1Q9BRV8 207 aa14.42□□□□□ -0.1
LSM1-201ENST00000311351 POTEKPQ9BYX7 375 aa14.42□□□□□ -0.1
LSM1-201ENST00000311351 ARMC7Q9H6L4 198 aa14.42□□□□□ -0.1
LSM1-201ENST00000311351 FGFR1OP2Q9NVK5 253 aa14.42□□□□□ -0.1
LSM1-201ENST00000311351 NDUFAF1Q9Y375 327 aa14.42□□□□□ -0.1
LSM1-201ENST00000311351 LIPT2A6NK58 231 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 EVPLLA8MZ36 301 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 ANGPT2O15123 496 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 TPST1O60507 370 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 AKR7A3O95154 331 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 GPX2P18283 190 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 COX5AP20674 150 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 PRKAR1BP31321 381 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 MTPNP58546 118 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 STK11Q15831 433 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 ADRM1Q16186 407 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 ACKR1Q16570 336 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 RUNDC3AQ59EK9 446 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 OTUD3Q5T2D3 398 aaPredicted RBP14.41□□□□□ -0.1
LSM1-201ENST00000311351 PAQR6Q6TCH4 344 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 SEZ6L2Q6UXD5 910 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 CASP12Q6UXS9 341 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 TGIF2LYQ8IUE0 185 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 TMEM99Q8N816 258 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 APH1AQ96BI3 265 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 HDHD5Q9BXW7 423 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 TMEM38AQ9H6F2 299 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 ADPRHL2Q9NX46 363 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 CORO2BQ9UQ03 480 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 FLVCR1Q9Y5Y0 555 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 C2CD3Q4AC94 2353 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 VPS13CQ709C8 3753 aa14.41□□□□□ -0.1
LSM1-201ENST00000311351 A8MVM7 634 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 GPR171O14626 319 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 EIF1BO60739 113 aaKnown RBP14.4□□□□□ -0.1
LSM1-201ENST00000311351 GPIP06744 558 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 HTR2AP28223 471 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 MAP2K6P52564 334 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 NR1H2P55055 460 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 FOXD4Q12950 439 aaPredicted RBP14.4□□□□□ -0.1
LSM1-201ENST00000311351 NFYCQ13952 458 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 CAPRIN1Q14444 709 aaKnown RBP14.4□□□□□ -0.1
LSM1-201ENST00000311351 DHRS4L2Q6PKH6 230 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 KRT73Q86Y46 540 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 PTOV1Q86YD1 416 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 KRTAP1-3Q8IUG1 177 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 UBE2J2Q8N2K1 259 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 DPP10Q8N608 796 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 WFDC11Q8NEX6 87 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 ANKRD27Q96NW4 1050 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 CGREF1Q99674 301 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 CCL19Q99731 98 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 NAA11Q9BSU3 229 aaPredicted RBP14.4□□□□□ -0.1
LSM1-201ENST00000311351 MED4Q9NPJ6 270 aa14.4□□□□□ -0.1
LSM1-201ENST00000311351 BEX4Q9NWD9 120 aaPredicted RBP14.4□□□□□ -0.1
LSM1-201ENST00000311351 SETD2Q9BYW2 2564 aaPredicted RBP14.39□□□□□ -0.11
LSM1-201ENST00000311351 ATP8B1O43520 1251 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 MRPL33O75394 65 aaKnown RBP14.39□□□□□ -0.11
LSM1-201ENST00000311351 RAD51DO75771 328 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 TROVE2P10155 538 aaKnown RBP eCLIP14.39□□□□□ -0.11
LSM1-201ENST00000311351 SLC6A2P23975 617 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 FOXG1P55316 489 aaPredicted RBP14.39□□□□□ -0.11
LSM1-201ENST00000311351 ADAM8P78325 824 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 SLC17A1Q14916 467 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 CYP51A1Q16850 503 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 C1orf140Q5VVS0 124 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 FBXW9Q5XUX1 488 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 ZNF433Q8N7K0 673 aaPredicted RBP14.39□□□□□ -0.11
LSM1-201ENST00000311351 OR52E4Q8NGH9 312 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 SLC35B4Q969S0 331 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 WFDC6Q9BQY6 131 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 TMEM204Q9BSN7 226 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 TMUB1Q9BVT8 246 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 PRR14Q9BWN1 585 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 TAPBPLQ9BX59 468 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 MALT1Q9UDY8 824 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 ANGPT4Q9Y264 503 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 SLC9A8Q9Y2E8 581 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 USF3Q68DE3 2245 aa14.39□□□□□ -0.11
LSM1-201ENST00000311351 A0A1B0GWA3 101 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 AQP7P3A6NL99 342 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 FBP2O00757 339 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 CLOCKO15516 846 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 NPIPB7O75200 414 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 CNOT4O95628 575 aaKnown RBP14.38□□□□□ -0.11
LSM1-201ENST00000311351 OPN1SWP03999 348 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 CD99P14209 185 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 GGT1P19440 569 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 P2RY4P51582 365 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 GUCY1A3Q02108 690 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 EGR4Q05215 589 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 DMTNQ08495 405 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 FAPQ12884 760 aa14.38□□□□□ -0.11
LSM1-201ENST00000311351 C9orf135Q5VTT2 229 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms