RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 HEATR5AQ86XA9 2040 aa19.36■□□□□ 0.69
ATG4D-201ENST00000309469 B4E171 279 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 ARPC3O15145 178 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 CLUP10909 449 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 CCKBRP32239 447 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 TSPAN7P41732 249 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 SLC16A1P53985 500 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 LTBQ06643 244 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 TPBGQ13641 420 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 FAM198BQ6UWH4 519 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 ACBD7Q8N6N7 88 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 FAM98AQ8NCA5 519 aaKnown RBP19.35■□□□□ 0.69
ATG4D-201ENST00000309469 OR6Q1Q8NGQ2 317 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 MOSPD2Q8NHP6 518 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 GPR119Q8TDV5 335 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 HGDQ93099 445 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 TMCO6Q96DC7 493 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 GPX7Q96SL4 187 aaPredicted RBP19.35■□□□□ 0.69
ATG4D-201ENST00000309469 WDR12Q9GZL7 423 aaKnown RBP19.35■□□□□ 0.69
ATG4D-201ENST00000309469 AKIP1Q9NQ31 210 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 HIF3AQ9Y2N7 669 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 ADAM18Q9Y3Q7 739 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 BLOC1S5-TXNDC5H3BN57 136 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 QPRTQ15274 297 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 OR52N1Q8NH53 320 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 MCFD2Q8NI22 146 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 FNDC8Q8TC99 324 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 DACH2Q96NX9 599 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 CMKLR1Q99788 373 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 EXOSC4Q9NPD3 245 aaKnown RBP19.35■□□□□ 0.69
ATG4D-201ENST00000309469 FBXL4Q9UKA2 621 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 R4GN57 208 aa19.35■□□□□ 0.69
ATG4D-201ENST00000309469 BDP1A6H8Y1 2624 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 VPS13AQ96RL7 3174 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 LOC102723996A0A087X1L8 192 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 C12orf71A8MTZ7 269 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 C9J4A7 227 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 IDH3BO43837 385 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 ASAH2BP0C7U1 165 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 IDUAP35475 653 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 AQP2P41181 271 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 ISXQ2M1V0 245 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 SDR9C7Q8NEX9 313 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 TAAR8Q969N4 342 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 HAO2Q9NYQ3 351 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 AKAP7Q9P0M2 348 aaPredicted RBP19.34■□□□□ 0.69
ATG4D-201ENST00000309469 MYOTQ9UBF9 498 aa19.34■□□□□ 0.69
ATG4D-201ENST00000309469 METTL15A6NJ78 407 aa19.33■□□□□ 0.69
ATG4D-201ENST00000309469 ERVK-25P63136 954 aa19.33■□□□□ 0.69
ATG4D-201ENST00000309469 ZNF791Q3KP31 576 aaPredicted RBP19.33■□□□□ 0.69
ATG4D-201ENST00000309469 POMZP3Q6PJE2 187 aa19.33■□□□□ 0.69
ATG4D-201ENST00000309469 ZNF517Q6ZMY9 492 aaPredicted RBP19.33■□□□□ 0.69
ATG4D-201ENST00000309469 TMEM99Q8N816 258 aa19.33■□□□□ 0.69
ATG4D-201ENST00000309469 UFD1Q92890 307 aa19.33■□□□□ 0.69
ATG4D-201ENST00000309469 KATNB1Q9BVA0 655 aa19.33■□□□□ 0.69
ATG4D-201ENST00000309469 CCDC59Q9P031 241 aaKnown RBP19.33■□□□□ 0.69
ATG4D-201ENST00000309469 SSR3Q9UNL2 185 aa19.33■□□□□ 0.69
ATG4D-201ENST00000309469 PTRH2Q9Y3E5 179 aaKnown RBP19.33■□□□□ 0.69
ATG4D-201ENST00000309469 TEX51A0A1B0GUA7 166 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 GYPBP06028 91 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 UMODP07911 640 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 POLR2HP52434 150 aaKnown RBP19.33■□□□□ 0.68
ATG4D-201ENST00000309469 ACSM1Q08AH1 577 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 C17orf67Q0P5P2 114 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 PCOLCEQ15113 449 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 COL28A1Q2UY09 1125 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 ZNF404Q494X3 552 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 ZNF322Q6U7Q0 402 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-201ENST00000309469 LRRC75AQ8NAA5 344 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 SPRYD4Q8WW59 207 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-201ENST00000309469 TTC9Q92623 222 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 KLHL1Q9NR64 748 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 ETAA1Q9NY74 926 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 TAS2R10Q9NYW0 307 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 ZNF229Q9UJW7 825 aa19.33■□□□□ 0.68
ATG4D-201ENST00000309469 CAB39Q9Y376 341 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-201ENST00000309469 FRYLO94915 3013 aa19.32■□□□□ 0.68
ATG4D-201ENST00000309469 KLF7O75840 302 aaPredicted RBP19.32■□□□□ 0.68
ATG4D-201ENST00000309469 WISP1O95388 367 aa19.32■□□□□ 0.68
ATG4D-201ENST00000309469 LALBAP00709 142 aa19.32■□□□□ 0.68
ATG4D-201ENST00000309469 SBK2P0C263 348 aa19.32■□□□□ 0.68
ATG4D-201ENST00000309469 RPS5P46782 204 aaKnown RBP19.32■□□□□ 0.68
ATG4D-201ENST00000309469 GALNT6Q8NCL4 622 aa19.32■□□□□ 0.68
ATG4D-201ENST00000309469 TRMT61AQ96FX7 289 aaKnown RBP19.32■□□□□ 0.68
ATG4D-201ENST00000309469 DEFB126Q9BYW3 111 aa19.32■□□□□ 0.68
ATG4D-201ENST00000309469 MMP27Q9H306 513 aa19.32■□□□□ 0.68
ATG4D-201ENST00000309469 ADGRL4Q9HBW9 690 aa19.32■□□□□ 0.68
ATG4D-201ENST00000309469 INPP5EQ9NRR6 644 aa19.32■□□□□ 0.68
ATG4D-201ENST00000309469 TRAV36DV7A0A075B6V5 113 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 PNMA8CA0A1B0GUJ8 204 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 DAPL1A0PJW8 107 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 C2orf72A6NCS6 295 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 PLD2O14939 933 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 HIST1H2ABP04908 130 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 CD59P13987 128 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 UQCRC1P31930 480 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 ALG10Q5BKT4 473 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 LYPD8Q6UX82 237 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 TMPRSS11AQ6ZMR5 421 aa19.31■□□□□ 0.68
ATG4D-201ENST00000309469 HIST3H2AQ7L7L0 130 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms