RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 A0A1B0GVT2 93 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 MAS1P04201 325 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
CDT1-201ENST00000301019 AP3S2P59780 193 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DYRK1AQ13627 763 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 PRPF38BQ5VTL8 546 aaKnown RBP13.32□□□□□ -0.28
CDT1-201ENST00000301019 GDF6Q6KF10 455 aaPredicted RBP13.32□□□□□ -0.28
CDT1-201ENST00000301019 OR4C16Q8NGL9 310 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 TGM7Q96PF1 710 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 ATG101Q9BSB4 218 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 TSPAN10Q9H1Z9 355 aaPredicted RBP13.32□□□□□ -0.28
CDT1-201ENST00000301019 SLC38A1Q9H2H9 487 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 FN3KQ9H479 309 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 XKR8Q9H6D3 395 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 CAMK2AQ9UQM7 478 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 HTTP42858 3142 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 FEZF1A0PJY2 475 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 H7C1Q1 480 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 M0R036 132 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 KDELR3O43731 214 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 VNN2O95498 520 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 C6P13671 934 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 SPAM1P38567 509 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 P2RX1P51575 399 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 NR0B1P51843 470 aaKnown RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 GFOD2Q3B7J2 385 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 ZNF697Q5TEC3 545 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 MED27Q6P2C8 311 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 OR6V1Q8N148 313 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 BRIX1Q8TDN6 353 aaKnown RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 MRPL38Q96DV4 380 aaKnown RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 RBM14Q96PK6 669 aaKnown RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 SELENOIQ9C0D9 397 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 BHLHE41Q9C0J9 482 aaPredicted RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 MAGEH1Q9H213 219 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 SLC25A32Q9H2D1 315 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 CACYBPQ9HB71 228 aaKnown RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 ZNF346Q9UL40 294 aaKnown RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 ZMIZ1Q9ULJ6 1067 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 NOP16Q9Y3C1 178 aaKnown RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 TRAV14DV4A0A0A6YYC5 116 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 A0A1W2PPH5 198 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 MBLAC1A4D2B0 266 aaPredicted RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 EPPINO95925 133 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 CORO1AP31146 461 aaKnown RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 CD52P31358 61 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 RORAP35398 523 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 ATP1B3P54709 279 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 SSX2Q16385 188 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 NAXDQ8IW45 347 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 SLAMF9Q96A28 289 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 SCN2AQ99250 2005 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 TIMP4Q99727 224 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 STOX2Q9P2F5 926 aaPredicted RBP13.31□□□□□ -0.28
CDT1-201ENST00000301019 NDOR1Q9UHB4 597 aa13.31□□□□□ -0.28
CDT1-201ENST00000301019 HELZP42694 1942 aaKnown RBP13.3□□□□□ -0.28
CDT1-201ENST00000301019 TRAV27A0A087WT01 109 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 IMPA2O14732 288 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 TBL1XO60907 577 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 MT-ND5P03915 603 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 CD2P06729 351 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 HSD3B2P26439 372 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 ITPKBP27987 946 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 GABRR2P28476 465 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 AVPR2P30518 371 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 P2RY4P51582 365 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 AGERQ15109 404 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 XKR4Q5GH76 650 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 OLFML2AQ68BL7 652 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 ZC3H14Q6PJT7 736 aaKnown RBP13.3□□□□□ -0.28
CDT1-201ENST00000301019 TAF8Q7Z7C8 310 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 FAM24BQ8N5W8 94 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 CCDC54Q8NEL0 328 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 ELP5Q8TE02 316 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 VOPP1Q96AW1 172 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 CNTNAP3BQ96NU0 1288 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 SMOC1Q9H4F8 434 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 RNF215Q9Y6U7 377 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 GREB1Q4ZG55 1949 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 PLXND1Q9Y4D7 1925 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 TRBV2A0A0J9YWF9 115 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 ZNF821O75541 412 aaPredicted RBP13.3□□□□□ -0.28
CDT1-201ENST00000301019 STX11O75558 287 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 OR2A4O95047 310 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 PCDH8O95206 1070 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 CKMP06732 381 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 PRF1P14222 555 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 NME2P22392 152 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 HTR2AP28223 471 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 CD80P33681 288 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 ZNF805Q5CZA5 627 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 CXCL17Q6UXB2 119 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 TPGS1Q6ZTW0 290 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 AMER3Q8N944 861 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 OR2A7Q96R45 310 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 SSX3Q99909 188 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 GGACTQ9BVM4 153 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 HCSTQ9UBK5 93 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 A0A1B0GTH9 108 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms