RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 B3GAT2Q9NPZ5 323 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 SLC39A1Q9NY26 324 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 ALX3O95076 343 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 RNH1P13489 461 aaKnown RBP12.31□□□□□ -0.44
CASC4-201ENST00000299957 HIST1H1CP16403 213 aaKnown RBP12.31□□□□□ -0.44
CASC4-201ENST00000299957 GRK1Q15835 563 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 ZNF550Q7Z398 422 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 NUP54Q7Z3B4 507 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 NEK7Q8TDX7 302 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 MAP6Q96JE9 813 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 ARHGAP9Q9BRR9 750 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 HCAR1Q9BXC0 346 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 SYT4Q9H2B2 425 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 MIXL1Q9H2W2 232 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 PIGUQ9H490 435 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 V9GY05 133 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 A0A1B0GTH9 108 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 AGAP14A8MT82 685 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 ZNF705EA8MWA4 302 aaPredicted RBP12.31□□□□□ -0.44
CASC4-201ENST00000299957 ZNF780AO75290 641 aaPredicted RBP12.31□□□□□ -0.44
CASC4-201ENST00000299957 GPR75O95800 540 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 TDGQ13569 410 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 TCTE1Q5JU00 501 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 TMIEQ8NEW7 156 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 DCLRE1CQ96SD1 692 aaKnown RBP12.31□□□□□ -0.44
CASC4-201ENST00000299957 NUDT22Q9BRQ3 303 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 ZNF350Q9GZX5 532 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 RNF32Q9H0A6 362 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 LIN7BQ9HAP6 207 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 PLEKHB1Q9UF11 243 aaPredicted RBP12.31□□□□□ -0.44
CASC4-201ENST00000299957 TMEM129A0AVI4 362 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 SLC16A7O60669 478 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 PRPH2P23942 346 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 RPL35P42766 123 aaKnown RBP12.3□□□□□ -0.44
CASC4-201ENST00000299957 SORDQ00796 357 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 THSD4Q6ZMP0 1018 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 QSOX2Q6ZRP7 698 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 GPR155Q7Z3F1 870 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 PLPP7Q8NBV4 271 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 RNASE11Q8TAA1 199 aaKnown RBP12.3□□□□□ -0.44
CASC4-201ENST00000299957 LRRC3BQ96PB8 259 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 IL23AQ9NPF7 189 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 CD93Q9NPY3 652 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 MSRAQ9UJ68 235 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 POLEQ07864 2286 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 BRCA2P51587 3418 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 SLC33A1O00400 549 aaPredicted RBP12.3□□□□□ -0.44
CASC4-201ENST00000299957 MRPL19P49406 292 aaKnown RBP12.3□□□□□ -0.44
CASC4-201ENST00000299957 DUSP2Q05923 314 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 GPNMBQ14956 572 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 NSDHLQ15738 373 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 MAPK14Q16539 360 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 OR10K2Q6IF99 312 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 LINC00299Q6ZSB3 139 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 LRRC56Q8IYG6 542 aaPredicted RBP12.3□□□□□ -0.44
CASC4-201ENST00000299957 GALNT6Q8NCL4 622 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 MNTQ99583 582 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 MFFQ9GZY8 342 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 GLTPQ9NZD2 209 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 KLHL21Q9UJP4 597 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 WNK3Q9BYP7 1800 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 M0QYG6 137 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 PLA2G10O15496 165 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 SFTPBP07988 381 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 HCKP08631 526 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 FPR3P25089 353 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 LSSP48449 732 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 FXNQ16595 210 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 SLC22A10Q63ZE4 541 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 SLC25A24Q6NUK1 477 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 PEG10Q86TG7 708 aaKnown RBP12.3□□□□□ -0.44
CASC4-201ENST00000299957 SFTPA2Q8IWL1 248 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 OR4D9Q8NGE8 314 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 OR52B4Q8NGK2 314 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 ZNF775Q96BV0 537 aaPredicted RBP12.3□□□□□ -0.44
CASC4-201ENST00000299957 REV1Q9UBZ9 1251 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 ICKQ9UPZ9 632 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 DHDHQ9UQ10 334 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 NUBP2Q9Y5Y2 271 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 ICE1Q9Y2F5 2266 aa12.3□□□□□ -0.44
CASC4-201ENST00000299957 ZNF878C9JN71 531 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 LGALS8O00214 317 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 LANCL1O43813 399 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 AHSA1O95433 338 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 PDGFAP04085 211 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 ITGA5P08648 1049 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 UGT2B7P16662 529 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 PCBP3P57721 371 aaKnown RBP12.29□□□□□ -0.44
CASC4-201ENST00000299957 ACTA2P62736 377 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 ACTG2P63267 376 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 TPBGQ13641 420 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 KIAA1211LQ6NV74 962 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 ZCCHC12Q6PEW1 402 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 C3P1Q6ZMU1 363 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 ACBD4Q8NC06 268 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 ABHD1Q96SE0 405 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 ATF6BQ99941 703 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 RPP25Q9BUL9 199 aaKnown RBP12.29□□□□□ -0.44
CASC4-201ENST00000299957 SIRT3Q9NTG7 399 aaPredicted RBP12.29□□□□□ -0.44
CASC4-201ENST00000299957 LRIT1Q9P2V4 623 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms