RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TRAPPC2LQ9UL33 140 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 IMPA2O14732 288 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HSD17B6O14756 317 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MRPL33O75394 65 aaKnown RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PMP2P02689 132 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ACP2P11117 423 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CD38P28907 300 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TACR3P29371 465 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SHEQ5VZ18 495 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GLB1L2Q8IW92 636 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR4M1Q8NGD0 313 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ASB11Q8WXH4 323 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ACOT11Q8WXI4 607 aaPredicted RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FOXRED1Q96CU9 486 aaPredicted RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NICN1Q9BSH3 213 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NUMBLQ9Y6R0 609 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MYO10Q9HD67 2058 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 LOC102725191A0A1B0GVB3 256 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 A8MXE2 369 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FZD7O75084 574 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TACR1P25103 407 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 POLR2IP36954 125 aaKnown RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 C14orf28Q4W4Y0 310 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TANGO2Q6ICL3 276 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ALKAL2Q6UX46 152 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR1J4Q8NGS1 313 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GORASP2Q9H8Y8 452 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 LRP6O75581 1613 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 EGFP01133 1207 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FAM160A2Q8N612 972 aaPredicted RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR5K2Q8NHB8 316 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF587Q96SQ5 575 aaPredicted RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NMNAT2Q9BZQ4 307 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZMAT3Q9HA38 289 aaKnown RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GOLGA4Q13439 2230 aaKnown RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CCDC88AQ3V6T2 1871 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CACNA1FO60840 1977 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 P2RY10O00398 339 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CHRNB1P11230 501 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MAKP20794 623 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 IL2RGP31785 369 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PTGER4P35408 488 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TRIM61Q5EBN2 209 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CLEC14AQ86T13 490 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GRAMD2AQ8IUY3 354 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MMP21Q8N119 569 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 BABAM2Q9NXR7 383 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SIGLEC6O43699 453 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SCAF4O95104 1147 aaKnown RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CALCBP10092 127 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GABRA5P31644 462 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ERVFC1P60507 584 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 METAP1DQ6UB28 335 aaPredicted RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 C19orf47Q8N9M1 422 aaKnown RBP12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR6F1Q8NGZ6 308 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NMNAT3Q96T66 252 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PRRT1Q99946 306 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SGPP1Q9BX95 441 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 UBQLN4Q9NRR5 601 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KLHL42Q9P2K6 505 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HHLA2Q9UM44 414 aa12.63□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FADS1O60427 444 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR7C1O76099 320 aaPredicted RBP12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 IGHV3-9P01782 118 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KCNJ10P78508 379 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CYCSP99999 105 aaKnown RBP12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FAM69AQ5T7M9 428 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PRICKLE2Q7Z3G6 844 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ATOH8Q96SQ7 321 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HRASLSQ9HDD0 168 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 A0A087WUU8 490 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 IGHV3-20A0A0C4DH32 117 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CBR1P16152 277 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MRPS34P82930 218 aaKnown RBP12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 EBPQ15125 230 aaKnown RBP12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TMEM244Q5VVB8 128 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TPRA1Q86W33 373 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ARRDC2Q8TBH0 407 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SECTM1Q8WVN6 248 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SPIN2AQ99865 258 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SPIN2BQ9BPZ2 258 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HHATLQ9HCP6 504 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 IGHV3-64DA0A0J9YX35 117 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 METTL15A6NJ78 407 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CRYZL1O95825 349 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TSFMP43897 325 aaKnown RBP12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MTCP1P56278 107 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MFSD9Q8NBP5 474 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 UTP4Q969X6 686 aaKnown RBP12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 LMF2Q9BU23 707 aaKnown RBP12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TPPP3Q9BW30 176 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 METTL17Q9H7H0 456 aaPredicted RBP12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ATG4BQ9Y4P1 393 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CLN5O75503 358 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GJA4P35212 333 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TATDN3Q17R31 274 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MKXQ8IYA7 352 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 WDSUB1Q8N9V3 476 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms