RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CCDC3Q9BQI4 270 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 GSX2Q9BZM3 304 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 TMEM27Q9HBJ8 222 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 ISYNA1Q9NPH2 558 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 MRPL15Q9P015 296 aaKnown RBP12.41□□□□□ -0.42
CTDP1-202ENST00000299543 PHF11Q9UIL8 331 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 KCNE5Q9UJ90 142 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 PCDHGB7Q9Y5F8 929 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 FAM171A2A8MVW0 826 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 SGK494L7N484 410 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 EGFP01133 1207 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 MT-ND5P03915 603 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 LPLP06858 475 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 HOXB2P14652 356 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 GRPRP30550 384 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 FXYD6P3P58550 94 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 ERVK-25P63136 954 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 MELKQ14680 651 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 TMEM44Q2T9K0 475 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 EIPR1Q53HC9 387 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 SLC6A19Q695T7 634 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 MRGPREQ86SM8 312 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 GID4Q8IVV7 300 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 OR52E2Q8NGJ4 325 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 C2CD4CQ8TF44 421 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 PRSS27Q9BQR3 290 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 H0YGG7 62 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 RCBTB2O95199 551 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 FCARP24071 287 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 RPL4P36578 427 aaKnown RBP12.41□□□□□ -0.42
CTDP1-202ENST00000299543 BLVRAP53004 296 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 ARF3P61204 181 aaPredicted RBP12.41□□□□□ -0.42
CTDP1-202ENST00000299543 LGALS3BPQ08380 585 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 GPR176Q14439 515 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 ARHGAP11BQ3KRB8 267 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 ITPRIPL2Q3MIP1 535 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 HSD17B12Q53GQ0 312 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 PRAMEF8Q5VWM4 474 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 PRAMEF7Q5VXH5 474 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 TMEM88Q6PEY1 159 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF619Q8N2I2 560 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 TRMT10AQ8TBZ6 339 aaKnown RBP12.41□□□□□ -0.42
CTDP1-202ENST00000299543 RFT1Q96AA3 541 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 ERMAPQ96PL5 475 aaPredicted RBP12.41□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF649Q9BS31 505 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 FN3KQ9H479 309 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 PRELID3BQ9Y3B1 194 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 HEBP2Q9Y5Z4 205 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 SPTBN5Q9NRC6 3674 aaKnown RBP12.4□□□□□ -0.42
CTDP1-202ENST00000299543 CDHR4A6H8M9 788 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 GMFGO60234 142 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 CT62P0C5K7 136 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 SNRPBP14678 240 aaKnown RBP12.4□□□□□ -0.42
CTDP1-202ENST00000299543 UGT2B7P16662 529 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 ATP12AP54707 1039 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 SF3A2Q15428 464 aaKnown RBP12.4□□□□□ -0.42
CTDP1-202ENST00000299543 ACSM3Q53FZ2 586 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 LURAP1LQ8IV03 231 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 OR4N2Q8NGD1 307 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF671Q8TAW3 534 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 ABHD4Q8TB40 342 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 SP7Q8TDD2 431 aaPredicted RBP12.4□□□□□ -0.42
CTDP1-202ENST00000299543 SMPDL3BQ92485 455 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF559Q9BR84 538 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 IER2Q9BTL4 223 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 BCL2L14Q9BZR8 327 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 IL21RQ9HBE5 538 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 EXOGQ9Y2C4 368 aaKnown RBP12.4□□□□□ -0.42
CTDP1-202ENST00000299543 SPACA6W5XKT8 324 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 WDR87Q6ZQQ6 2873 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 URADA6NGE7 173 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 SLC9B1P1A6NJY1 282 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 PRSS44E7EML9 344 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 H7C2Y5 167 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 IGHA1P01876 353 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 ACSL1P33121 698 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 GPR18Q14330 331 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 NDUFAF6Q330K2 333 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 AKIRIN2Q53H80 203 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 TMEM196Q5HYL7 178 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 BICRALQ6AI39 1079 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 PARGQ86W56 976 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 ZFP82Q8N141 532 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 RFLNBQ8N5W9 214 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
CTDP1-202ENST00000299543 OR5J2Q8NH18 312 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 FAM3CQ92520 227 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 NR4A3Q92570 626 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 GHSRQ92847 366 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 KIAA1143Q96AT1 154 aaPredicted RBP12.4□□□□□ -0.42
CTDP1-202ENST00000299543 MARVELD1Q9BSK0 173 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 KIR3DX1Q9H7L2 352 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 ASB6Q9NWX5 421 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 PFDN2Q9UHV9 154 aa12.4□□□□□ -0.42
CTDP1-202ENST00000299543 TDRD6O60522 2096 aaKnown RBP12.4□□□□□ -0.43
CTDP1-202ENST00000299543 ATG12O94817 140 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 KLF8O95600 359 aaPredicted RBP12.39□□□□□ -0.43
CTDP1-202ENST00000299543 AGR2O95994 175 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 DBIP07108 87 aaKnown RBP12.39□□□□□ -0.43
CTDP1-202ENST00000299543 TFPIP10646 304 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms