RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 ANKRD46Q86W74 232 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 ZNF563Q8TA94 476 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 RAB8BQ92930 207 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 APH1AQ96BI3 265 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 ARL8AQ96BM9 186 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 FBXO17Q96EF6 278 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 SLC35G5Q96KT7 338 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 PPP1R36Q96LQ0 422 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 INPP5KQ9BT40 448 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 TRMOQ9BU70 441 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 C19orf24Q9BVV8 132 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 BHLHE41Q9C0J9 482 aaPredicted RBP8.12□□□□□ -1.11
CNOT9-202ENST00000295701 ZNF350Q9GZX5 532 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 SHARPINQ9H0F6 387 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 CHODLQ9H9P2 273 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 SLC17A5Q9NRA2 495 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 SLC7A10Q9NS82 523 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 ATAD3AQ9NVI7 634 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 ASB6Q9NWX5 421 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 TMEM160Q9NX00 188 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 TAS2R16Q9NYV7 291 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 EMC3Q9P0I2 261 aa8.12□□□□□ -1.11
CNOT9-202ENST00000295701 IGHV4-61A0A0C4DH41 118 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 RNF103-CHMP3A0A140T963 221 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 TMEM72A0PK05 275 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 ZC3H12DA2A288 527 aaKnown RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 VWC2LB2RUY7 222 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 ATP6V1G2-DDX39BF2Z307 99 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 H7C417 338 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 PDLIM1O00151 329 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 AP3D1O14617 1153 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 KLF11O14901 512 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 MRPL33O75394 65 aaKnown RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 LYPLA1O75608 230 aaPredicted RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 CPSF4O95639 269 aaKnown RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 PMS2P2O95744 297 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 CDH2P19022 906 aaPredicted RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 PRPS1L1P21108 318 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 USF1P22415 310 aaPredicted RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 APOBEC3AP31941 199 aaPredicted RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 RPL3P39023 403 aaKnown RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 APOBEC1P41238 236 aaKnown RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 IDH2P48735 452 aaKnown RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 GGTLC2Q14390 218 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 TSPO2Q5TGU0 170 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 CASP12Q6UXS9 341 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 FRRS1Q6ZNA5 592 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 EIF3MQ7L2H7 374 aaKnown RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 C16orf62Q7Z3J2 963 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 ANKS4BQ8N8V4 417 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 FAM71CQ8NEG0 241 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 OR4A15Q8NGL6 344 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 XAGE5Q8WWM1 108 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 TMEM234Q8WY98 164 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 CNOT9Q92600 299 aaKnown RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 PROX1Q92786 737 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 C3orf49Q96BT1 292 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 MOAP1Q96BY2 351 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 TUBGCP3Q96CW5 907 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 FOXN4Q96NZ1 517 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 SORCS2Q96PQ0 1159 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 PRPF18Q99633 342 aaKnown RBP8.11□□□□□ -1.11
CNOT9-202ENST00000295701 SOX7Q9BT81 388 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 MALT1Q9UDY8 824 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 CHRNA9Q9UGM1 479 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 MID2Q9UJV3 735 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 MOKQ9UQ07 419 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 FLVCR1Q9Y5Y0 555 aa8.11□□□□□ -1.11
CNOT9-202ENST00000295701 DYSFO75923 2080 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 LOC100289279A0A1B0GTE1 492 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 DUXAA6NLW8 204 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 GPR171O14626 319 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 ITM2AO43736 263 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 KIAA0513O60268 411 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 SCN2BO60939 215 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 C8BP07358 591 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 SLC16A1P53985 500 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 CLDN8P56748 225 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 H3F3AP84243 136 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 LGALS3BPQ08380 585 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 CARTPTQ16568 116 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 HIKESHIQ53FT3 197 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 FAM120AOSQ5T036 256 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 OR7E24Q6IFN5 339 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 ZNF544Q6NX49 715 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 GRINAQ7Z429 371 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 ZDHHC13Q8IUH4 622 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 NATD1Q8N6N6 113 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 ZIC4Q8N9L1 334 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 PIGXQ8TBF5 258 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 TCP10LQ8TDR4 215 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 SLC25A43Q8WUT9 341 aaPredicted RBP8.1□□□□□ -1.11
CNOT9-202ENST00000295701 ROPN1LQ96C74 230 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 MSI2Q96DH6 328 aaKnown RBP8.1□□□□□ -1.11
CNOT9-202ENST00000295701 ZHX1-C8orf76Q96EF9 292 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 APOPT1Q96IL0 206 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 AMBRA1Q9C0C7 1298 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 EML4Q9HC35 981 aaKnown RBP8.1□□□□□ -1.11
CNOT9-202ENST00000295701 EXD2Q9NVH0 621 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms