RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZNF705FA8MVS1 300 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 GABRPO00591 440 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 ANKRD28O15084 1053 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 CLEC3AO75596 197 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 KNG1P01042 644 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF705DP0CH99 300 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF705BP0CI00 300 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 RSU1Q15404 277 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 CSRP2Q16527 193 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 CLVS2Q5SYC1 327 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 MEPCEQ7L2J0 689 aaKnown RBP11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 LYSMD2Q8IV50 215 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 RNF128Q8TEB7 428 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 PAQR8Q8TEZ7 354 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 GIMAP1Q8WWP7 306 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 TGM7Q96PF1 710 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 VSTM2BA6NLU5 285 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 GABRR3A8MPY1 467 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 GPR39O43194 453 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 ICMTO60725 284 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 LILRB5O75023 590 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 MPIG6BO95866 241 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 SCG5P05408 212 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 PCSK6P29122 969 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 DDOSTP39656 456 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 CSNK1EP49674 416 aaKnown RBP11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF140P52738 457 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 GALK2Q01415 458 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 TAGLNQ01995 201 aaKnown RBP11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 MRPL49Q13405 166 aaKnown RBP11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 HBMQ6B0K9 141 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 PODNL1Q6PEZ8 512 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 SERPINA12Q8IW75 414 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 LILRB2Q8N423 598 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 SUMF2Q8NBJ7 301 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 TERB2Q8NHR7 220 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 CREB3L4Q8TEY5 395 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 UBXN10Q96LJ8 280 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 PITHD1Q9GZP4 211 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 MED17Q9NVC6 651 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 LUZP4Q9P127 313 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 KIF25Q9UIL4 384 aa11.02□□□□□ -0.65
SYNGAP1-201ENST00000293748 DCDC2BA2VCK2 349 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 RAB19A4D1S5 217 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR6C6A6NF89 314 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 MROH6A6NGR9 719 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 SMIM18P0DKX4 95 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TMEM225BP0DP42 221 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 ARAFP10398 606 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 DUSP7Q16829 419 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF765Q7L2R6 523 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF687Q8N1G0 1237 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 WDSUB1Q8N9V3 476 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC22A8Q8TCC7 542 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR52D1Q9H346 318 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 GAREM1Q9H706 876 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TXNL4BQ9NX01 149 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 B3GNT2Q9NY97 397 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 IER3IP1Q9Y5U9 82 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 HELZP42694 1942 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TSPAN11A1L157 253 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 LATO43561 262 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 HMGN2P05204 90 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 NFYAP23511 347 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 PKLRP30613 574 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 POLR2IP36954 125 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 DEFA6Q01524 100 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 PLGLB1Q02325 96 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TCF15Q12870 199 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 RIN1Q13671 783 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF169Q14929 603 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 RBMS2Q15434 407 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 LCTLQ6UWM7 567 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 PDZD3Q86UT5 571 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 LAX1Q8IWV1 398 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 LSMEM2Q8N112 164 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 C4orf36Q96KX1 117 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC6A18Q96N87 628 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF416Q9BWM5 594 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC25A18Q9H1K4 315 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TSPAN10Q9H1Z9 355 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 EMC7Q9NPA0 242 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 PPP4R1LQ9P1A2 415 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 COPS3Q9UNS2 423 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 NEU3Q9UQ49 428 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 ANKRD33BA6NCL7 494 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 FABP7O15540 132 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 OIP5O43482 229 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TRAPPC6AO75865 159 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 CTSLP07711 333 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 FUT1P19526 365 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 RGRP47804 291 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 GPR50Q13585 617 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 GBX1Q14549 363 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TMEM244Q5VVB8 128 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 APOOLQ6UXV4 268 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 LIPIQ6XZB0 460 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 Q6ZSR6 202 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR4N5Q8IXE1 308 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZDHHC12Q96GR4 267 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms