RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 PROX1Q92786 737 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 RNASE6Q93091 150 aaKnown RBP11.91□□□□□ -0.5
VPS28-201ENST00000292510 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 ZNF300Q96RE9 604 aaPredicted RBP11.91□□□□□ -0.5
VPS28-201ENST00000292510 SPOCK3Q9BQ16 436 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 PSD2Q9BQI7 771 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 C12orf49Q9H741 205 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 TMEM27Q9HBJ8 222 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 SPAG4Q9NPE6 437 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 GALNT8Q9NY28 637 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 ADA2Q9NZK5 511 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 PRDM4Q9UKN5 801 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 TRAPPC4Q9Y296 219 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 SH3GLB1Q9Y371 365 aa11.91□□□□□ -0.5
VPS28-201ENST00000292510 ANKHD1Q8IWZ3 2542 aaKnown RBP11.91□□□□□ -0.5
VPS28-201ENST00000292510 FBN2P35556 2912 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 ABCA12Q86UK0 2595 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 ITPR2Q14571 2701 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 IGKV1D-42A0A075B6H8 117 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 LIPT2A6NK58 231 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 MSTNO14793 375 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 HNRNPRO43390 633 aaKnown RBP11.9□□□□□ -0.5
VPS28-201ENST00000292510 NPIPB7O75200 414 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 THY1P04216 161 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 PRF1P14222 555 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 OR1E2P47887 323 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 MAP2K6P52564 334 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 CDH12P55289 794 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 MXRA7P84157 204 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 NOTCH2Q04721 2471 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 RNPS1Q15287 305 aaKnown RBP11.9□□□□□ -0.5
VPS28-201ENST00000292510 EXOC3L2Q2M3D2 409 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 ENTPD8Q5MY95 495 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 EEF1A1P5Q5VTE0 462 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 GTF2IRD2BQ6EKJ0 949 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 ABLIM2Q6H8Q1 611 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 ULK3Q6PHR2 472 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 C6orf89Q6UWU4 347 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 GTF2IRD2Q86UP8 949 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 PGAM4Q8N0Y7 254 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 SLC43A2Q8N370 569 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 ZNF610Q8N9Z0 462 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 OR6K3Q8NGY3 331 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 DNAJA4Q8WW22 397 aaPredicted RBP11.9□□□□□ -0.5
VPS28-201ENST00000292510 RASSF5Q8WWW0 418 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 KTI12Q96EK9 354 aaPredicted RBP11.9□□□□□ -0.5
VPS28-201ENST00000292510 SLC47A1Q96FL8 570 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 TPD52L3Q96J77 140 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 POTEKPQ9BYX7 375 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 GLRX2Q9NS18 164 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 KLHL9Q9P2J3 617 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 EGFL7Q9UHF1 273 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 BAG5Q9UL15 447 aa11.9□□□□□ -0.5
VPS28-201ENST00000292510 ZNF716A6NP11 495 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 FMO6PO60774 539 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 AKR7A3O95154 331 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 LYPD3O95274 346 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 AHSA1O95433 338 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 IFNA14P01570 189 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 GPIP06744 558 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 YES1P07947 543 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 CD8BP10966 210 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 PNMTP11086 282 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 GGT1P19440 569 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 TCN1P20061 433 aaPredicted RBP11.89□□□□□ -0.51
VPS28-201ENST00000292510 EDNRAP25101 427 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 RPS5P46782 204 aaKnown RBP11.89□□□□□ -0.51
VPS28-201ENST00000292510 SLC35A1P78382 337 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 H3F3AP84243 136 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 FAM27E3Q08E93 113 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 TMEM201Q5SNT2 666 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 DEF8Q6ZN54 512 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.89□□□□□ -0.51
VPS28-201ENST00000292510 DEFB107AQ8IZN7 70 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 TMEM99Q8N816 258 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 STK35Q8TDR2 534 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 ADAMTS16Q8TE57 1224 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 SLC38A4Q969I6 547 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 SLC25A36Q96CQ1 311 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 ZHX1-C8orf76Q96EF9 292 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 LRRC46Q96FV0 321 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 NSL1Q96IY1 281 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 CDRT15Q96T59 188 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 PTDSS2Q9BVG9 487 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 EVA1AQ9H8M9 152 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 C12orf10Q9HB07 376 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 PLSCR4Q9NRQ2 329 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 ADPRHL2Q9NX46 363 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 SELENONQ9NZV5 590 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 SLC9A8Q9Y2E8 581 aa11.89□□□□□ -0.51
VPS28-201ENST00000292510 A0A087WUJ7 227 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 DNPH1O43598 174 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 ZNF682O95780 498 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 SERPINA1P01009 418 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 T-ENOLP0DO92 83 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 MSX2P35548 267 aaPredicted RBP11.88□□□□□ -0.51
VPS28-201ENST00000292510 SELENOWP63302 87 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 OTUD3Q5T2D3 398 aaPredicted RBP11.88□□□□□ -0.51
VPS28-201ENST00000292510 ZNF613Q6PF04 617 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 C16orf89Q6UX73 402 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms