RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ARHGAP12Q8IWW6 846 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 OR5D16Q8NGK9 328 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 OR13C4Q8NGS5 318 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 IFI44Q8TCB0 444 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 FAM122AQ96E09 287 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 PARD6GQ9BYG4 376 aaPredicted RBP8.52□□□□□ -1.04
PDGFC-201ENST00000274071 IL20RAQ9UHF4 553 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 SLC27A6Q9Y2P4 619 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 CHST10O43529 356 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 CBR3O75828 277 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 DIRAS3O95661 229 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 SOD3P08294 240 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 SLC35G4P0C7Q5 338 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 THEGLP0DJG4 465 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 PRPS2P11908 318 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 ADH7P40394 386 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 GIPRP48546 466 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 IL2P60568 153 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 CACNG1Q06432 222 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 RPE65Q16518 533 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 AMHR2Q16671 573 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 ISXQ2M1V0 245 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF750Q32MQ0 723 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 DUSP28Q4G0W2 176 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 NRROSQ86YC3 692 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 THNSL2Q86YJ6 484 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 ETFBKMTQ8IXQ9 262 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 LINC01465Q8N7H1 131 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 PCSK9Q8NBP7 692 aaKnown RBP8.52□□□□□ -1.05
PDGFC-201ENST00000274071 RNF141Q8WVD5 230 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 GEMIN6Q8WXD5 167 aaKnown RBP8.52□□□□□ -1.05
PDGFC-201ENST00000274071 SLC25A38Q96DW6 304 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 FKRPQ9H9S5 495 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 PLEKHA1Q9HB21 404 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 GPATCH2Q9NW75 528 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 OR14J1Q9UGF5 321 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 GPR52Q9Y2T5 361 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 ANK1P16157 1881 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 OR5H14A6NHG9 310 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 HSPA12AO43301 675 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 PTBP3O95758 552 aaKnown RBP8.52□□□□□ -1.05
PDGFC-201ENST00000274071 CD74P04233 296 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 RLN1P04808 185 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 ATF1P18846 271 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 IL2RGP31785 369 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 DCTDP32321 178 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 GJA4P35212 333 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 CAV2P51636 162 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 TDGF1P3P51864 188 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 LIM2P55344 173 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 MAXP61244 160 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 ARMC12Q5T9G4 340 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 GLT8D1Q68CQ7 371 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 OR2A2Q6IF42 318 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 GDF6Q6KF10 455 aaPredicted RBP8.52□□□□□ -1.05
PDGFC-201ENST00000274071 TIPARPQ7Z3E1 657 aaKnown RBP8.52□□□□□ -1.05
PDGFC-201ENST00000274071 BPIFB2Q8N4F0 458 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 OR10AD1Q8NGE0 317 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 SLC25A36Q96CQ1 311 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 CDKN2AIPNLQ96HQ2 116 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 AKR1E2Q96JD6 320 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 TMEM106CQ9BVX2 250 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 HRH4Q9H3N8 390 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 RDH14Q9HBH5 336 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 CHRNA9Q9UGM1 479 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 SLC22A14Q9Y267 594 aa8.52□□□□□ -1.05
PDGFC-201ENST00000274071 IRGMA1A4Y4 181 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 OR52A4PA6NMU1 304 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 OR2AT4A6NND4 320 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 LOC730098B7Z3J9 87 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 GLCEO94923 617 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 LRG1P02750 347 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 FAM157CP0CG43 387 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ARF4P18085 180 aaPredicted RBP8.51□□□□□ -1.05
PDGFC-201ENST00000274071 MPZP25189 248 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 AHRP35869 848 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 OPRD1P41143 372 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 CCL23P55773 120 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ACVR1Q04771 509 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 FAM110CQ1W6H9 321 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 AWAT1Q58HT5 328 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 SIRPB2Q5JXA9 342 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ARMC6Q6NXE6 501 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 GAREM2Q75VX8 874 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 OR5R1Q8NH85 324 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 LINC01599Q8WXQ3 324 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 C22orf15Q8WYQ4 148 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 SLC39A8Q9C0K1 460 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ISG20L2Q9H9L3 353 aaKnown RBP8.51□□□□□ -1.05
PDGFC-201ENST00000274071 FN3KRPQ9HA64 309 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 RRAGCQ9HB90 399 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ZFYVE1Q9HBF4 777 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TMEM161AQ9NX61 479 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 NUDT4Q9NZJ9 180 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 KCND3Q9UK17 655 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 DOCK3Q8IZD9 2030 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3DA0A087WVF3 549 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3IA0A087WXS9 549 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3EA0A087X179 549 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3KA0A087X1G2 549 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms