RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 A6NHS1 94 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 POM121CA8CG34 1229 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 BET1O15155 118 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 GALR3O60755 368 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 IGFBP6P24592 240 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 VEGFCP49767 419 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 RAB38P57729 211 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 MRPS21P82921 87 aaKnown RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 BCL2A1Q16548 175 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 NIPAL3Q6P499 406 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 METAP1DQ6UB28 335 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 SBSNQ6UWP8 590 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 ARL5BQ96KC2 179 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 TOX2Q96NM4 488 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 SPIN2AQ99865 258 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 SPIN2BQ9BPZ2 258 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 BCL7BQ9BQE9 202 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 C17orf113A0A1B0GUU1 675 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 FURINP09958 794 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 CST5P28325 142 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 RPL35P42766 123 aaKnown RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 LINC00346Q8IVM7 164 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 PAQR8Q8TEZ7 354 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 HLA-CQ95604 372 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 SERTAD4Q9NUC0 356 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 CD300AQ9UGN4 299 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 TSPAN11A1L157 253 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 SCGB2A1O75556 95 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 IFNA10P01566 189 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 HLA-AP01891 365 aaKnown RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 MMP2P08253 660 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 CDK4P11802 303 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 MAOAP21397 527 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 IRS1P35568 1242 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 RPS25P62851 125 aaKnown RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 RELAQ04206 551 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 MLLT11Q13015 90 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 LILRA2Q8N149 483 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 BPIFB2Q8N4F0 458 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 FAM160A2Q8N612 972 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 AGBL5Q8NDL9 886 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 TSPAN10Q9H1Z9 355 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 RPS10P5Q9NQ39 176 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 TRAPPC2LH3BP13 241 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 I6L893 689 aaPredicted RBP10.65□□□□□ -0.7
USP53-201ENST00000274030 SERPINA7P05543 415 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 GPR19Q15760 415 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 MED25Q71SY5 747 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ZNF595Q8IYB9 648 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 POC1BQ8TC44 478 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ARL11Q969Q4 196 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ZNF486Q96H40 463 aaPredicted RBP10.65□□□□□ -0.7
USP53-201ENST00000274030 CNTNAP3BQ96NU0 1288 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 GLIPR2Q9H4G4 154 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 FGF21Q9NSA1 209 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 TMEM202A6NGA9 273 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 METTL15A6NJ78 407 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ARHGAP33O14559 1287 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 CER1O95813 267 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 TAS2R20P59543 309 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 SIRPAP78324 504 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 PDE7AQ13946 482 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 MAVSQ7Z434 540 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 SLC35F3Q8IY50 421 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 OR1J4Q8NGS1 313 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 TMEM255BQ8WV15 326 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 PRRT1Q99946 306 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ALG12Q9BV10 488 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 DYNLRB1Q9NP97 96 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 SIT1Q9Y3P8 196 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ATG4BQ9Y4P1 393 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ASB4Q9Y574 426 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 NAP1L6A6NFF2 107 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ARGFXA6NJG6 315 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 K7ESM1 405 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 PTHP01270 115 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 FCGR2AP12318 317 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 IL2RGP31785 369 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 TNK1Q13470 666 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 RAB31Q13636 194 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 SPNS2Q8IVW8 549 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 TEX37Q96LM6 180 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 SLC6A18Q96N87 628 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 USB1Q9BQ65 265 aaKnown RBP10.65□□□□□ -0.7
USP53-201ENST00000274030 OSGIN1Q9UJX0 560 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ZNF281Q9Y2X9 895 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 MRPS14O60783 128 aaKnown RBP10.65□□□□□ -0.7
USP53-201ENST00000274030 FBXO24O75426 580 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 RFPL3O75679 317 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ATP1B3P54709 279 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 TAS2R31P59538 309 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 TBCEQ15813 527 aaPredicted RBP10.65□□□□□ -0.7
USP53-201ENST00000274030 SLC14A2Q15849 920 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 TATDN3Q17R31 274 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 OR52W1Q6IF63 320 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 C12orf45Q8N5I9 185 aaPredicted RBP10.65□□□□□ -0.7
USP53-201ENST00000274030 C22orf15Q8WYQ4 148 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 ZNF566Q969W8 418 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 CALHM2Q9HA72 323 aa10.65□□□□□ -0.7
USP53-201ENST00000274030 RGPD2P0DJD1 1756 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms