RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 ZNF516Q92618 1163 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 SGPP1Q9BX95 441 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 SEMA6CQ9H3T2 930 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 MSCO60682 206 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 SLC11A1P49279 550 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 ZNF90Q03938 601 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 OTOP2Q7RTS6 562 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 OR2D3Q8NGH3 330 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 TMEM231Q9H6L2 316 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 ZDHHC11Q9H8X9 412 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 HHATLQ9HCP6 504 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 TOR2AQ5JU69 321 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 DVL3Q92997 716 aaPredicted RBP10.47□□□□□ -0.73
CHFR-201ENST00000266880 NKX3-1Q99801 234 aaPredicted RBP10.47□□□□□ -0.73
CHFR-201ENST00000266880 TLR9Q9NR96 1032 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 MYOTQ9UBF9 498 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 PQLC3Q8N755 202 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 GAB3Q8WWW8 586 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 TANKQ92844 425 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 GRM2Q14416 872 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 MPEG1Q2M385 716 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 FCRLAQ7L513 359 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 CMTM2Q8TAZ6 248 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 IL17FQ96PD4 163 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 MED20Q9H944 212 aa10.47□□□□□ -0.73
CHFR-201ENST00000266880 KDM4FA0A1W2PPD8 638 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 G3V3Q6 166 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 MPGP29372 298 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 HACD4Q5VWC8 232 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 HSD17B11Q8NBQ5 300 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 ACRV1P26436 265 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 SLC10A6Q3KNW5 377 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 PLEKHS1Q5SXH7 462 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 ZNF691Q5VV52 312 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 FAM57BQ71RH2 274 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 C20orf85Q9H1P6 137 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 MRPS17Q9Y2R5 130 aaKnown RBP10.46□□□□□ -0.73
CHFR-201ENST00000266880 CDHR4A6H8M9 788 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 H3BML4 177 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 GYPBP06028 91 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 GM2AP17900 193 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 SNCAP37840 140 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 GLYR1Q49A26 553 aaPredicted RBP10.46□□□□□ -0.73
CHFR-201ENST00000266880 DACT2Q5SW24 774 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 TMEM88Q6PEY1 159 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 C2orf15Q8WU43 125 aaKnown RBP10.46□□□□□ -0.73
CHFR-201ENST00000266880 ZNF355PQ9NSJ1 428 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 DOCK11Q5JSL3 2073 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 TARBP1Q13395 1621 aaKnown RBP10.46□□□□□ -0.73
CHFR-201ENST00000266880 FAM209AQ5JX71 171 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 NDUFAF7Q7L592 441 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 OR2G3Q8NGZ4 309 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 CITED1Q99966 193 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 POPDC3Q9HBV1 291 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 ATP13A2Q9NQ11 1180 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 GAR1Q9NY12 217 aaKnown RBP10.46□□□□□ -0.73
CHFR-201ENST00000266880 GABRPO00591 440 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 AKR7A3O95154 331 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 KCNC3Q14003 757 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 KCNRGQ8N5I3 272 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 HSD17B8Q92506 261 aa10.46□□□□□ -0.73
CHFR-201ENST00000266880 S100A11P31949 105 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 KREMEN2Q8NCW0 462 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 TFAP2CQ92754 450 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 HLA-CQ95604 372 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 NXF2Q9GZY0 626 aaKnown RBP10.46□□□□□ -0.74
CHFR-201ENST00000266880 EXOSC3Q9NQT5 275 aaKnown RBP10.46□□□□□ -0.74
CHFR-201ENST00000266880 METTL15A6NJ78 407 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 NRP1O14786 923 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 TCF21O43680 179 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 MRPS14O60783 128 aaKnown RBP10.46□□□□□ -0.74
CHFR-201ENST00000266880 DOC2AQ14183 400 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 CRLF2Q9HC73 371 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 SPATA31A1Q5TZJ5 1347 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 DCTN6O00399 190 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 C21orf33P30042 268 aaPredicted RBP10.46□□□□□ -0.74
CHFR-201ENST00000266880 S100A7P31151 101 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 PHLDA2Q53GA4 152 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 LANCL3Q6ZV70 420 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 CELF5Q8N6W0 485 aaKnown RBP10.46□□□□□ -0.74
CHFR-201ENST00000266880 OR5B2Q96R09 309 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 SEMA4CQ9C0C4 833 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 TINAGL1Q9GZM7 467 aaPredicted RBP10.46□□□□□ -0.74
CHFR-201ENST00000266880 SAP130Q9H0E3 1048 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 SMOC2Q9H3U7 446 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 PRAMEF11O60813 436 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 RPA2P15927 270 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 DIO1P49895 249 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 MAMDC4Q6UXC1 1216 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 NAGSQ8N159 534 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 CMASQ8NFW8 434 aaPredicted RBP10.46□□□□□ -0.74
CHFR-201ENST00000266880 CHST11Q9NPF2 352 aa10.46□□□□□ -0.74
CHFR-201ENST00000266880 LRIT2A6NDA9 550 aa10.45□□□□□ -0.74
CHFR-201ENST00000266880 GALTP07902 379 aa10.45□□□□□ -0.74
CHFR-201ENST00000266880 ZNF30P17039 623 aa10.45□□□□□ -0.74
CHFR-201ENST00000266880 MELKQ14680 651 aa10.45□□□□□ -0.74
CHFR-201ENST00000266880 ZNF239Q16600 458 aaKnown RBP10.45□□□□□ -0.74
CHFR-201ENST00000266880 CATSPEREQ5SY80 951 aa10.45□□□□□ -0.74
CHFR-201ENST00000266880 C11orf54Q9H0W9 315 aaPredicted RBP10.45□□□□□ -0.74
CHFR-201ENST00000266880 FAM124BQ9H5Z6 455 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms