RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 PAMR1Q6UXH9 720 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 OVCH1Q7RTY7 1134 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 DNASE2BQ8WZ79 361 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 PDE7BQ9NP56 450 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 ZNF275Q9NSD4 429 aaPredicted RBP10.19□□□□□ -0.78
MSH3-201ENST00000265081 ANKRD10Q9NXR5 420 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 CTDSPLO15194 276 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 TSPAN2O60636 221 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 CSTAP01040 98 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 GIMD1P0DJR0 217 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 SPI1P17947 270 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 DCAF7P61962 342 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 SMAD2Q15796 467 aaKnown RBP10.19□□□□□ -0.78
MSH3-201ENST00000265081 OR51A7Q8NH64 312 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 RNF121Q9H920 327 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 BTCP35070 178 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 RPL22L1Q6P5R6 122 aaKnown RBP10.19□□□□□ -0.78
MSH3-201ENST00000265081 APOOLQ6UXV4 268 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 C11orf74Q86VG3 221 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 Q8N402 240 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 LRRC17Q8N6Y2 441 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 RBCK1Q9BYM8 510 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 HEATR5AQ86XA9 2040 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 OR6C68A6NDL8 312 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 OIP5O43482 229 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 SERPINA3P01011 423 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 KMT5CQ86Y97 462 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 SLC35F2Q8IXU6 374 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 TCTE3Q8IZS6 198 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 OR10H4Q8NGA5 316 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 ZDHHC12Q96GR4 267 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 ZNF486Q96H40 463 aaPredicted RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 ERMAPQ96PL5 475 aaPredicted RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 LMAN1LQ9HAT1 526 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 MMP25Q9NPA2 562 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 RABL2AQ9UBK7 228 aaPredicted RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 RABL2BQ9UNT1 228 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 MOKQ9UQ07 419 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 RNF215Q9Y6U7 377 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 OR6C76A6NM76 312 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 GSTZ1O43708 216 aaPredicted RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 NUDT21O43809 227 aaKnown RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 GLCEO94923 617 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 ABHD16AO95870 558 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 ONECUT2O95948 504 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 IGHMP01871 453 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 SHC1P29353 583 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 NR4A2P43354 598 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 SQSTM1Q13501 440 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 FCRLBQ6BAA4 426 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 ZNF321PQ8N8H1 164 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 ZNF527Q8NB42 609 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 ZPLD1Q8TCW7 415 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 SLC7A6Q92536 515 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 OR2B2Q9GZK3 357 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 POU2F3Q9UKI9 436 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 COPS3Q9UNS2 423 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 EIF4EP06730 217 aaKnown RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 SLC2A2P11168 524 aaPredicted RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 UBL4AP11441 157 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 LTBQ06643 244 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 ERV3-1Q14264 604 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 NDUFAF6Q330K2 333 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 PYDC2Q56P42 97 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 OR52E2Q8NGJ4 325 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 MMABQ96EY8 250 aaPredicted RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 LMF1Q96S06 567 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 GFI1Q99684 422 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 TGIF2Q9GZN2 237 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 CUTCQ9NTM9 273 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 COMMD3Q9UBI1 195 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 TNRC18O15417 2968 aaPredicted RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 C17orf105B2RV13 164 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 GPRIN2O60269 458 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 TMCC2O75069 709 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 SLC6A1P30531 599 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 MAP2K3P46734 347 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 PLA1AQ53H76 456 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 CAMKK1Q8N5S9 505 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 LMX1AQ8TE12 382 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 ARSGQ96EG1 525 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 LCORQ96JN0 433 aaPredicted RBP10.18□□□□□ -0.78
MSH3-201ENST00000265081 ABRACLQ9P1F3 81 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 IER3IP1Q9Y5U9 82 aa10.18□□□□□ -0.78
MSH3-201ENST00000265081 FER1L5A0AVI2 2057 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 IGHV1OR21-1A0A087WYE8 117 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 HSPB2A8KAH6 182 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 SLC43A1O75387 559 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 PIAS2O75928 621 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 UTS2O95399 124 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 SLC6A8P48029 635 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 TMED10P49755 219 aaKnown RBP10.17□□□□□ -0.78
MSH3-201ENST00000265081 HNRNPKP61978 463 aaKnown RBP eCLIP10.17□□□□□ -0.78
MSH3-201ENST00000265081 SIRPAP78324 504 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 DMWDQ09019 674 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 ELAVL1Q15717 326 aaKnown RBP10.17□□□□□ -0.78
MSH3-201ENST00000265081 HSPB2Q16082 182 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 WDR74Q6RFH5 385 aaPredicted RBP10.17□□□□□ -0.78
MSH3-201ENST00000265081 CDC20BQ86Y33 519 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 SDR9C7Q8NEX9 313 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms