RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SLC5A6Q9Y289 635 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 DOPEY2Q9Y3R5 2298 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 SPTAN1Q13813 2472 aaKnown RBP16.45■□□□□ 0.22
SDF4-201ENST00000263741 IGHV3-15A0A0B4J1V0 119 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 AHRRA9YTQ3 701 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 J3KTA2 159 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 TGM6O95932 706 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 GLI4P10075 376 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 GABRA1P14867 456 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 HTR3AP46098 478 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 ADORA2A-AS1P86434 159 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 PON3Q15166 354 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 SGCBQ16585 318 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 SPATS1Q496A3 300 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 WDR88Q6ZMY6 472 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 C9orf106Q8NAJ2 232 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 PHF10Q8WUB8 498 aaKnown RBP16.45■□□□□ 0.22
SDF4-201ENST00000263741 EME1Q96AY2 570 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 CNBD2Q96M20 576 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 CLCF1Q9UBD9 225 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 RPS6KA6Q9UK32 745 aa16.45■□□□□ 0.22
SDF4-201ENST00000263741 A0A1B0GUH1 482 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 ELOA3DA6NLF2 546 aaPredicted RBP16.44■□□□□ 0.22
SDF4-201ENST00000263741 E9PLN8 166 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 ADAMDEC1O15204 470 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 ZG16O60844 167 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 TOXO94900 526 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 SMIM18P0DKX4 95 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 MYBPHQ13203 477 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 PIN1Q13526 163 aaPredicted RBP16.44■□□□□ 0.22
SDF4-201ENST00000263741 ELOA3BQ3SY89 546 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 CHMP1BQ7LBR1 199 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 ELOA3Q8NG57 546 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 ZPLD1Q8TCW7 415 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 GEMIN6Q8WXD5 167 aaKnown RBP16.44■□□□□ 0.22
SDF4-201ENST00000263741 VKORC1Q9BQB6 163 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 ACTR3BQ9P1U1 418 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 RHCGQ9UBD6 479 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 SAMD4AQ9UPU9 718 aaKnown RBP16.44■□□□□ 0.22
SDF4-201ENST00000263741 AP4S1Q9Y587 144 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 DOPEY1Q5JWR5 2465 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 hCG_2039718K7EN88 272 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 AGFG2O95081 481 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 RPS3AP61247 264 aaKnown RBP16.44■□□□□ 0.22
SDF4-201ENST00000263741 ADGRE4PQ86SQ3 457 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 SATL1Q86VE3 508 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 GCNT2Q8N0V5 402 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 NAXEQ8NCW5 288 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 OSTF1Q92882 214 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 DGCR14Q96DF8 476 aaKnown RBP16.44■□□□□ 0.22
SDF4-201ENST00000263741 TRIM15Q9C019 465 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 SLC7A7Q9UM01 511 aa16.44■□□□□ 0.22
SDF4-201ENST00000263741 IGKV1D-42A0A075B6H8 117 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 GJE1A6NN92 205 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 AQP8O94778 261 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 LYPD3O95274 346 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 IFNW1P05000 195 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 TAS2R41P59536 307 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 KCNC4Q03721 635 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 NSUN5P2Q63ZY6 315 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 LCN8Q6JVE9 175 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 ULK3Q6PHR2 472 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 TSEN54Q7Z6J9 526 aaKnown RBP16.43■□□□□ 0.22
SDF4-201ENST00000263741 DHFR2Q86XF0 187 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 CCDC71Q8IV32 467 aaPredicted RBP16.43■□□□□ 0.22
SDF4-201ENST00000263741 SLC25A43Q8WUT9 341 aaPredicted RBP16.43■□□□□ 0.22
SDF4-201ENST00000263741 ROBO4Q8WZ75 1007 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 PTTG2Q9NZH5 202 aa16.43■□□□□ 0.22
SDF4-201ENST00000263741 SPIN1Q9Y657 262 aaPredicted RBP16.43■□□□□ 0.22
SDF4-201ENST00000263741 SLC22A20A6NK97 555 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 FMO6PO60774 539 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 DIRAS1O95057 198 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 DIO1P49895 249 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 CARD18P57730 90 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 VLDLRP98155 873 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 EGR4Q05215 589 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 ZNF613Q6PF04 617 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 DNAJA4Q8WW22 397 aaPredicted RBP16.42■□□□□ 0.22
SDF4-201ENST00000263741 UCN2Q96RP3 112 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 EVA1AQ9H8M9 152 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 TCRBV5S2A0A599 114 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 TRAPPC13A5PLN9 417 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 MT-ND1P03886 318 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 IMPDH2P12268 514 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 LSAMPQ13449 338 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 P4HA3Q7Z4N8 544 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 GDF7Q7Z4P5 450 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 EID3Q8N140 333 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 GALNT4Q8N4A0 578 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 SLC38A4Q969I6 547 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 DDIT4LQ96D03 193 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 SLC47A1Q96FL8 570 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 SLC41A3Q96GZ6 507 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 SEPHS2Q99611 448 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 SELENONQ9NZV5 590 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 A4GNTQ9UNA3 340 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 FREM1Q5H8C1 2179 aa16.42■□□□□ 0.22
SDF4-201ENST00000263741 A0A0G2JNJ9 132 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 CD8B2A6NJW9 211 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 KPNA4O00629 521 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms