RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 GFI1Q99684 422 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 TEX101Q9BY14 249 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 MCCC2Q9HCC0 563 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 PHPT1Q9NRX4 125 aaPredicted RBP16.07■□□□□ 0.16
TRAM1-201ENST00000262213 SDHAF2Q9NX18 166 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 FLRT3Q9NZU0 649 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 FKBP7Q9Y680 259 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 RNF215Q9Y6U7 377 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 PIN1P1O15428 100 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 FKTNO75072 461 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 PTP4A3O75365 173 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 RPP14O95059 124 aaKnown RBP16.06■□□□□ 0.16
TRAM1-201ENST00000262213 IFNGP01579 166 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 THBS1P07996 1170 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 CPMP14384 443 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 VASPP50552 380 aaPredicted RBP16.06■□□□□ 0.16
TRAM1-201ENST00000262213 UBE2MP61081 183 aaKnown RBP16.06■□□□□ 0.16
TRAM1-201ENST00000262213 HTRA3P83110 453 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 STX4Q12846 297 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 METTL11BQ5VVY1 283 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 RPL13AP3Q6NVV1 102 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 FAM199XQ6PEV8 388 aaPredicted RBP16.06■□□□□ 0.16
TRAM1-201ENST00000262213 ZNF296Q8WUU4 475 aaPredicted RBP16.06■□□□□ 0.16
TRAM1-201ENST00000262213 SLC25A38Q96DW6 304 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 RAB11FIP5Q9BXF6 653 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 LIN7BQ9HAP6 207 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 TBX21Q9UL17 535 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 NPTNQ9Y639 398 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 A0A1B0GWA3 101 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 P2RX6O15547 441 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 ADAM11O75078 769 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 TSPAN9O75954 239 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 RPL4P36578 427 aaKnown RBP16.06■□□□□ 0.16
TRAM1-201ENST00000262213 PLAURQ03405 335 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 SPRED2Q7Z698 418 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 GPAT4Q86UL3 456 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 FCAMRQ8WWV6 532 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 GAL3ST3Q96A11 431 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 KLHL9Q9P2J3 617 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 ZNF346Q9UL40 294 aaKnown RBP16.06■□□□□ 0.16
TRAM1-201ENST00000262213 ALPK2Q86TB3 2170 aa16.06■□□□□ 0.16
TRAM1-201ENST00000262213 CHURC1-FNTBB4DL54 471 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 ARPC5O15511 151 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 OGG1O15527 345 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 FMO6PO60774 539 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 SLC6A6P31641 620 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 SOX2P48431 317 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 TMEM69Q5SWH9 247 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 TMEM81Q6P7N7 255 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 PRSS41Q7RTY9 318 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 SYNPRQ8TBG9 265 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 SMARCD2Q92925 531 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 PMEPA1Q969W9 287 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 NMNAT3Q96T66 252 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 HDAC8Q9BY41 377 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 TSPAN10Q9H1Z9 355 aaPredicted RBP16.05■□□□□ 0.16
TRAM1-201ENST00000262213 C12orf10Q9HB07 376 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 PIPOXQ9P0Z9 390 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 PCDHGA5Q9Y5G8 931 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 EML2O95834 649 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 AK4P27144 223 aaPredicted RBP16.05■□□□□ 0.16
TRAM1-201ENST00000262213 TUSC1Q2TAM9 212 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 FAM69AQ5T7M9 428 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 AGBL4Q5VU57 503 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 FAM198BQ6UWH4 519 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 DNAAF1Q8NEP3 725 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 ZPLD1Q8TCW7 415 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 HSPA12BQ96MM6 686 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 GINS4Q9BRT9 223 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 ANKRD10Q9NXR5 420 aa16.05■□□□□ 0.16
TRAM1-201ENST00000262213 MCIDASD6RGH6 385 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 TGM6O95932 706 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 CEACAM5P06731 702 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 HOXD4P09016 255 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-201ENST00000262213 EMDP50402 254 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 GAB4Q2WGN9 574 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 ZNF425Q6IV72 752 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 PSRC1Q6PGN9 363 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-201ENST00000262213 BAIAP2L2Q6UXY1 529 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 OVCH1Q7RTY7 1134 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 RADILQ96JH8 1075 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 OR1F2PQ96R84 312 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 PPA2Q9H2U2 334 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 NANSQ9NR45 359 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 TAS2R10Q9NYW0 307 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 NCDNQ9UBB6 729 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 DPP7Q9UHL4 492 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 IFITM5A6NNB3 132 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 C4orf47A7E2U8 309 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 SLC35G6P0C7Q6 338 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 TLX1P31314 330 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-201ENST00000262213 ALG10BQ5I7T1 473 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 ARHGAP11AQ6P4F7 1023 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 KCTD20Q7Z5Y7 419 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 OR5T3Q8NGG3 340 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 NPDC1Q9NQX5 325 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-201ENST00000262213 C2orf42Q9NWW7 574 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 MRPS2Q9Y399 296 aaKnown RBP16.04■□□□□ 0.16
TRAM1-201ENST00000262213 A0A1B0GUH1 482 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 ZNF879B4DU55 563 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms