RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TOMM20Q15388 145 aa24.92■■□□□ 1.58
SMARCD3-201ENST00000262188 EXOC3L2Q2M3D2 409 aa24.92■■□□□ 1.58
SMARCD3-201ENST00000262188 ANKRD34AQ69YU3 496 aa24.92■■□□□ 1.58
SMARCD3-201ENST00000262188 RBMXL3Q8N7X1 1067 aaKnown RBP24.92■■□□□ 1.58
SMARCD3-201ENST00000262188 C3orf49Q96BT1 292 aa24.92■■□□□ 1.58
SMARCD3-201ENST00000262188 TRIM2Q9C040 744 aa24.92■■□□□ 1.58
SMARCD3-201ENST00000262188 TAS2R10Q9NYW0 307 aa24.92■■□□□ 1.58
SMARCD3-201ENST00000262188 KLF13Q9Y2Y9 288 aaPredicted RBP24.92■■□□□ 1.58
SMARCD3-201ENST00000262188 A0A0B4J2E0 115 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 A0A1B0GX12 115 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 FAM166BA8MTA8 275 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 GADD45GO95257 159 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 H1F0P07305 194 aaKnown RBP24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 SLC6A8P48029 635 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 SEC23BQ15437 767 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 TBPL2Q6SJ96 375 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 IGFL3Q6UXB1 125 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 MEX3DQ86XN8 651 aaKnown RBP24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 TFAP2CQ92754 450 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 C1GALT1C1Q96EU7 318 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 PRORYQ9H606 182 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 NEK6Q9HC98 313 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 RPS6KB2Q9UBS0 482 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 ISPDA4D126 451 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 TRAPPC13A5PLN9 417 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 TNFRSF11BO00300 401 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 FMO6PO60774 539 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 ITGB2P05107 769 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 FREM3P0C091 2139 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 FCGR1AP12314 374 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 ALG10BQ5I7T1 473 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 PIK3C3Q8NEB9 887 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 TMEM255BQ8WV15 326 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 DNAJA3Q96EY1 480 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 CENPNQ96H22 339 aaPredicted RBP24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 PRSS27Q9BQR3 290 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 REEP1Q9H902 201 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 ZFP64Q9NPA5 681 aa24.91■■□□□ 1.58
SMARCD3-201ENST00000262188 OR5F1O95221 314 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 PRKACGP22612 351 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 IL32P24001 234 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 TACR3P29371 465 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 PPP2R2BQ00005 443 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 FOXF1Q12946 379 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 WBP2NLQ6ICG8 309 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 EPHX4Q8IUS5 362 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 SLC38A6Q8IZM9 456 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 OFCC1Q8IZS5 231 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 ASCC1Q8N9N2 400 aaKnown RBP24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 SLC7A13Q8TCU3 470 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 NRBF2Q96F24 287 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 ARHGAP9Q9BRR9 750 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 TTTY12Q9BZ98 90 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 COQ10BQ9H8M1 238 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 AKIP1Q9NQ31 210 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 OAZ3Q9UMX2 235 aa24.9■■□□□ 1.58
SMARCD3-201ENST00000262188 ZSCAN5BA6NJL1 495 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 CELA3AP09093 270 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 DPP4P27487 766 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 MSX1P28360 303 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 PMS2P3Q13401 168 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 PLPPR5Q32ZL2 321 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 NHSL2Q5HYW2 709 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 OR4C15Q8NGM1 316 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 OR13F1Q8NGS4 319 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 CNTNAP3BQ96NU0 1288 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 UBL7Q96S82 380 aaPredicted RBP24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 CIB1Q99828 191 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 CNTNAP3Q9BZ76 1288 aa24.89■■□□□ 1.58
SMARCD3-201ENST00000262188 TRAV17A0A0B4J275 112 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 GP1BBP13224 206 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 IL11P20809 199 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 ELAVL4P26378 380 aaKnown RBP24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 SLC1A3P43003 542 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 ZNF41P51814 821 aaPredicted RBP24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 RNFT1Q5M7Z0 435 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 ZNF613Q6PF04 617 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 YRDCQ86U90 279 aaKnown RBP24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 TMEM178AQ8NBL3 297 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 POC1BQ8TC44 478 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 TM9SF4Q92544 642 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 BDH2Q9BUT1 245 aa24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 BOKQ9UMX3 212 aaPredicted RBP24.89■■□□□ 1.57
SMARCD3-201ENST00000262188 PKD1L2Q7Z442 2459 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 ADAMDEC1O15204 470 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 TSPAN9O75954 239 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 ZNF182P17025 639 aaPredicted RBP24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 GDF1P27539 372 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 CDH15P55291 814 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 SUMO3P55854 103 aaPredicted RBP24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 PLGLB1Q02325 96 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 PODNL1Q6PEZ8 512 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 ASB18Q6ZVZ8 466 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 CCDC28AQ8IWP9 274 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 PTGES2Q9H7Z7 377 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 EVA1AQ9H8M9 152 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 NPAP1Q9NZP6 1156 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 DKKL1Q9UK85 242 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 ITPR1Q14643 2758 aa24.88■■□□□ 1.57
SMARCD3-201ENST00000262188 PIP5K1CO60331 668 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms