RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 GNB3P16520 340 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 PTAFRP25105 342 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 PDE7AQ13946 482 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 SF3B4Q15427 424 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 HEPHL1Q6MZM0 1159 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 FAM83HQ6ZRV2 1179 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 PAQR9Q6ZVX9 377 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 METTL4Q8N3J2 472 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 PARP16Q8N5Y8 322 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 PRRT1Q99946 306 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 VRK1Q99986 396 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 CD300AQ9UGN4 299 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 POM121CA8CG34 1229 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 TIMM8AO60220 97 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 GM2AP17900 193 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 DCAF12Q5T6F0 453 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF585AQ6P3V2 769 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 NOXA1Q86UR1 476 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 OR5D18Q8NGL1 313 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 OR5M1Q8NGP8 315 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 HLA-CQ95604 372 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 PGAP2Q9UHJ9 254 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 BOKQ9UMX3 212 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 TIAM2Q8IVF5 1701 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 PIGBOS1A0A0B4J2F0 54 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 NAP1L6A6NFF2 107 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 SURF4O15260 269 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF264O43296 627 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 SSX4O60224 188 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 SNRPBP14678 240 aaKnown RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ARL6IP1Q15041 203 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 MKXQ8IYA7 352 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 PSMF1Q92530 271 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 WDR83Q9BRX9 315 aaKnown RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 NICN1Q9BSH3 213 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 KATNB1Q9BVA0 655 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 SLA2Q9H6Q3 261 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 BABAM2Q9NXR7 383 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 STK17BO94768 372 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 B3GALT4O96024 378 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 EN2P19622 333 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 IMPA1P29218 277 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 SLC6A19Q695T7 634 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 BCDIN3DQ7Z5W3 292 aaKnown RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 CLEC14AQ86T13 490 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 LINC00346Q8IVM7 164 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 TAAR8Q969N4 342 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 ATPIF1Q9UII2 106 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 RCE1Q9Y256 329 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 HEMK1Q9Y5R4 338 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 A0A087WUU8 490 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 HLA-AP01891 365 aaKnown RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 TACR1P25103 407 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 DAPP51397 102 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 PRDX1Q06830 199 aaKnown RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 MEF2DQ14814 521 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 COX20Q5RI15 118 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 MPP7Q5T2T1 576 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 LYPD4Q6UWN0 246 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 DNAJC22Q8N4W6 341 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 OR14A16Q8NHC5 309 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF486Q96H40 463 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 TNFRSF13CQ96RJ3 184 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 SLC22A12Q96S37 553 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 MICU1Q9BPX6 476 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 CMSS1Q9BQ75 279 aaKnown RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 NAA50Q9GZZ1 169 aaKnown RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 R3HDMLQ9H3Y0 253 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 GPATCH2Q9NW75 528 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 SLC23A2Q9UGH3 650 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 NOSIPQ9Y314 301 aaKnown RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 A0A1W2PQ09 198 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 IKZF1Q13422 519 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 PHOSPHO2Q8TCD6 241 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 GIMAP1Q8WWP7 306 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF566Q969W8 418 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 METTL9Q9H1A3 318 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 RAB9BQ9NP90 201 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 IL37Q9NZH6 218 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 TP53P04637 393 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 IL2RGP31785 369 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 SSR4P51571 173 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 ALKAL1Q6UXT8 129 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 GLB1L2Q8IW92 636 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 MRPL41Q8IXM3 137 aaKnown RBP11.25□□□□□ -0.61
COL8A1-201ENST00000261037 SLC35F3Q8IY50 421 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 DMBX1Q8NFW5 382 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 RNF128Q8TEB7 428 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 TMEM255BQ8WV15 326 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 HRH4Q9H3N8 390 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 ZFP57Q9NU63 452 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 NDUFAF4Q9P032 175 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 NENFQ9UMX5 172 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF281Q9Y2X9 895 aa11.25□□□□□ -0.61
COL8A1-201ENST00000261037 RAB27BO00194 218 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 UTS2O95399 124 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 NKX6-1P78426 367 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SORDQ00796 357 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 LRRC26Q2I0M4 334 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms