RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 GP1BAP07359 652 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PRR23D2P0DMB1 279 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PAICSP22234 425 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TALDO1P37837 337 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 RTP5Q14D33 572 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 NTRK2Q16620 822 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 ZSWIM7Q19AV6 140 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 RPTNQ6XPR3 784 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 MSANTD1Q6ZTZ1 278 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PXKQ7Z7A4 578 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 NAXDQ8IW45 347 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 OR56A1Q8NGH5 318 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 OR13C5Q8NGS8 318 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC25A28Q96A46 364 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 ZHX1-C8orf76Q96EF9 292 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 OR10A5Q9H207 317 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SYNDIG1Q9H7V2 258 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 DUSP22Q9NRW4 184 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 KRT84Q9NSB2 600 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PLEKHB1Q9UF11 243 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PLD2O14939 933 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 OR6A2O95222 327 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TGM6O95932 706 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 ETS2P15036 469 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 RNF4P78317 190 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 VAC14Q08AM6 782 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 FOXF2Q12947 444 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SPIDRQ14159 915 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TAB1Q15750 504 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TUSC1Q2TAM9 212 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 IZUMO2Q6UXV1 221 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF620Q6ZNG0 422 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 BBS10Q8TAM1 723 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 C15orf40Q8WUR7 153 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 FN3KQ9H479 309 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 NIPAL2Q9H841 368 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 CAB39Q9Y376 341 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 A0A0A6YYD4 124 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TMEM150CB9EJG8 249 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 RFXANKO14593 260 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SEC14L5O43304 696 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 ASNA1O43681 348 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TNFSF13O75888 250 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 APOL3O95236 402 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 GSTT1P30711 240 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 AKT2P31751 481 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 GALNSP34059 522 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SOAT1P35610 550 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 XKP51811 444 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 RAB38P57729 211 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 FAM98BQ52LJ0 330 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 RSBN1Q5VWQ0 802 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PRR23BQ6ZRT6 265 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TMPRSS11FQ6ZWK6 438 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 WDR86Q86TI4 376 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 MARCH3Q86UD3 253 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 LINC00471Q8N535 108 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 RELTQ969Z4 430 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 CXorf40BQ96DE9 158 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 MTERF3Q96E29 417 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TSPAN32Q96QS1 320 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 DOHHQ9BU89 302 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 DDX18Q9NVP1 670 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SPASTQ9UBP0 616 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 NDUFAF1Q9Y375 327 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TNFRSF10AO00220 468 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 IFNGP01579 166 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 C1QTNF9P0C862 333 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 NR4A1P22736 598 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 KIR3DL1P43629 444 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PRSS12P56730 875 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 CLDN18P56856 261 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PMP22Q01453 160 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 WDR45BQ5MNZ6 344 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 LDLRAD2Q5SZI1 272 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 OR52L1Q8NGH7 329 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 LCN9Q8WX39 176 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 TCTN2Q96GX1 697 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 CENPOQ9BU64 300 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC25A23Q9BV35 468 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 WDR76Q9H967 626 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 CCNB1IP1Q9NPC3 277 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 CUTCQ9NTM9 273 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 IMPAD1Q9NX62 359 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 MYOTQ9UBF9 498 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 GPR52Q9Y2T5 361 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SPIN1Q9Y657 262 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 A0A087WUJ7 227 aa5□□□□□ -1.61
TOPBP1-201ENST00000260810 A0A1W2PRB8 838 aa5□□□□□ -1.61
TOPBP1-201ENST00000260810 MPZL2O60487 215 aa5□□□□□ -1.61
TOPBP1-201ENST00000260810 IL18BPO95998 194 aa5□□□□□ -1.61
TOPBP1-201ENST00000260810 LIFP15018 202 aa5□□□□□ -1.61
TOPBP1-201ENST00000260810 HIST1H3AP68431 136 aa5□□□□□ -1.61
TOPBP1-201ENST00000260810 RPL19P84098 196 aaKnown RBP5□□□□□ -1.61
TOPBP1-201ENST00000260810 HIST2H3PS2Q5TEC6 136 aa5□□□□□ -1.61
TOPBP1-201ENST00000260810 TTC23Q5W5X9 447 aa5□□□□□ -1.61
TOPBP1-201ENST00000260810 HIST2H3AQ71DI3 136 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms