RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 APOLD1Q96LR9 279 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 HDAC8Q9BY41 377 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 GPR83Q9NYM4 423 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 MRPL15Q9P015 296 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC5A10A0PJK1 596 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 MAGEB17A8MXT2 336 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 KDM4EB2RXH2 506 aaPredicted RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ABOP16442 354 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SMPD1P17405 629 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OMGP23515 440 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ERVFC1-1P60608 527 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 IFITM3Q01628 133 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 PMS2P11Q13670 270 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 TRMT10BQ6PF06 316 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 PUSL1Q8N0Z8 303 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR52L2PQ8NGH6 319 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ABHD3Q8WU67 409 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 FKBP10Q96AY3 582 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 C3orf30Q96M34 536 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 AAASQ9NRG9 546 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF358Q9NW07 568 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OXSMQ9NWU1 459 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 MAST2Q6P0Q8 1798 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 MANBAO00462 879 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 GSTP1P09211 210 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 GGT5P36269 586 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 BUD31P41223 144 aaPredicted RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RFX2P48378 723 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 MTPNP58546 118 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 PTP4A2Q12974 167 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ACOT6Q3I5F7 207 aaPredicted RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RNLSQ5VYX0 342 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 AWAT2Q6E213 333 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 OR8G2PQ6IF36 304 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 FDX2Q6P4F2 183 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ACOT7LQ6ZUV0 252 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC51AQ86UW1 340 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 GPSM1Q86YR5 675 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 PRSS35Q8N3Z0 413 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 GLIS3Q8NEA6 775 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 OR6N2Q8NGY6 317 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC7A13Q8TCU3 470 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TGM7Q96PF1 710 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 IL4I1Q96RQ9 567 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 DUSP16Q9BY84 665 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CDCP1Q9H5V8 836 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ADAP2Q9NPF8 381 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM9BQ9NQ34 198 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 M0R3H8 397 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 SELENOFO60613 162 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 STK16O75716 305 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 SEMA4FO95754 770 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 UROSP10746 265 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 KHKP50053 298 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 SPRYD7Q5W111 196 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RHBDF2Q6PJF5 856 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 VITQ6UXI7 678 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 Q6ZTK2 550 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM135Q86UB9 458 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 NIT1Q86X76 327 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 PIGXQ8TBF5 258 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RPUSD4Q96CM3 377 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 FAM71F1Q96KD3 344 aaPredicted RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 MEPEQ9NQ76 525 aaPredicted RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC35A3Q9Y2D2 325 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 NRAPQ86VF7 1730 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 A0A0B4J2A0 478 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 A0A1B0GV50 99 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 GAGE10A6NGK3 116 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TP53I11O14683 189 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CTNSO60931 367 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF20P17024 532 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 MRPS6P82932 125 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TTLL9Q3SXZ7 439 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 DUSP28Q4G0W2 176 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TDRD10Q5VZ19 366 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TIFABQ6ZNK6 161 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 C1orf122Q6ZSJ8 110 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ACOT1Q86TX2 421 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 LRRC56Q8IYG6 542 aaPredicted RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 LGI4Q8N135 537 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 PTGR2Q8N8N7 351 aaPredicted RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 OR52R1Q8NGF1 315 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 COPS8Q99627 209 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ZFYVE21Q9BQ24 234 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CD244Q9BZW8 370 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 C1GALT1Q9NS00 363 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 UQCC1Q9NVA1 299 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TVP23BQ9NYZ1 205 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 SHPKQ9UHJ6 478 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RAI2Q9Y5P3 530 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CFAP20Q9Y6A4 193 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 A0A1W2PP18 115 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 C17orf105B2RV13 164 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 NFATC1O95644 943 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 FGF2P09038 288 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 HSD3B1P14060 373 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RIPPLY3P57055 190 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 AESQ08117 197 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms