RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TMEM9Q9P0T7 183 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 TRBV2A0A0J9YWF9 115 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 MYOCOSA0A1B0GUC4 107 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 TNFRSF1AP19438 455 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 POU3F4P49335 361 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 TSPAN31Q12999 210 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 APOFQ13790 326 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 MPEG1Q2M385 716 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 SLC35F1Q5T1Q4 408 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 MBOAT2Q6ZWT7 520 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 CBLL1Q75N03 491 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 ZNF709Q8N972 641 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 MFSD8Q8NHS3 518 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 FAM46AQ96IP4 442 aaKnown RBP12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 CSF3RQ99062 836 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 NUDT16L1Q9BRJ7 211 aaKnown RBP12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 RPP25Q9BUL9 199 aaKnown RBP12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 HES7Q9BYE0 225 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 TP63Q9H3D4 680 aaPredicted RBP12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 TMEM185BQ9H7F4 350 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 POLDIP2Q9Y2S7 368 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 GPR45Q9Y5Y3 372 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 TEX13DA0A0J9YY54 714 aaPredicted RBP12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 FAM25EA8MYX2 175 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 PPP1R3DO95685 299 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 CBX7O95931 251 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 HNRNPCP07910 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 UBBP0CG47 229 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 UBCP0CG48 685 aaKnown RBP12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 RBMXP38159 391 aaKnown RBP12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 ACTBP60709 375 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 ACTG1P63261 375 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 IER5LQ5T953 404 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 ARMC10Q8N2F6 343 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 LKAAEAR1Q8TD35 194 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 UBASH3BQ8TF42 649 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 MFRPQ9BY79 579 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 PAIP1Q9H074 479 aaKnown RBP12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 SDHAF2Q9NX18 166 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 STEAP1Q9UHE8 339 aa12.4□□□□□ -0.42
PRPF38A-201ENST00000257181 LINC00854A0A1B0GVQ3 168 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 B4DXG7 233 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 OR7A10O76100 309 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 MAOAP21397 527 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 EFNA3P52797 238 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF782Q6ZMW2 699 aaPredicted RBP12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 SLAMF9Q96A28 289 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 POTEKPQ9BYX7 375 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 METTL9Q9H1A3 318 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 DEFB127Q9H1M4 99 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 OAZ3Q9UMX2 235 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 FAM149AA5PLN7 773 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 CREBL2O60519 120 aaPredicted RBP12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 BCKDHBP21953 392 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 RPS26P62854 115 aaKnown RBP12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 SF3A2Q15428 464 aaKnown RBP12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 GLYR1Q49A26 553 aaPredicted RBP12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 GDPGP1Q6ZNW5 385 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 TSPYL5Q86VY4 417 aaPredicted RBP12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 NPEPL1Q8NDH3 523 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 SPIN2AQ99865 258 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 SPIN2BQ9BPZ2 258 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 NRSN2Q9GZP1 204 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 WWTR1Q9GZV5 400 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 SERTM1A2A2V5 107 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 XRCC2O43543 280 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 KLK8O60259 260 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 B4GALT3O60512 393 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 AGFG2O95081 481 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 ABHD16AO95870 558 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 MEOX1P50221 254 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 RAB40BQ12829 278 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 KEAP1Q14145 624 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 THEM4Q5T1C6 240 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 LYPD8Q6UX82 237 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 OR9I1Q8NGQ6 314 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 LRRN3E7EW58 273 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 OR7A17O14581 309 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 GPR4P46093 362 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 MAP4K2Q12851 820 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 PPP1R3AQ16821 1122 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 KCTD19Q17RG1 926 aaPredicted RBP12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 OR5T2Q8NGG2 359 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 OR4K13Q8NH42 304 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 CHPT1Q8WUD6 406 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 PHYHIPQ92561 330 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 PIGMQ9H3S5 423 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 C12orf10Q9HB07 376 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 SLCO1C1Q9NYB5 712 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 AASSQ9UDR5 926 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 A0A075B6Q4 140 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 GNAO1P09471 354 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 RSPO4Q2I0M5 234 aaPredicted RBP12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF718Q3SXZ3 478 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 ENTHD1Q8IYW4 607 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 ALG14Q96F25 216 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 NXF5Q9H1B4 397 aaKnown RBP12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 TCFL5Q9UL49 500 aa12.39□□□□□ -0.43
PRPF38A-201ENST00000257181 HIF3AQ9Y2N7 669 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms