RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ABCA1O95477 2261 aa18.53■□□□□ 0.56
NEDD8-201ENST00000250495 SLCO1B7G3V0H7 640 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 RFXANKO14593 260 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 NDUFS7O75251 213 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 IL6P05231 212 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 IMPDH2P12268 514 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 CD40P25942 277 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 EPHA3P29320 983 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 TTKP33981 857 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 TGFBR3Q03167 851 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 KRTAP1-1Q07627 177 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 EPS8Q12929 822 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 COX20Q5RI15 118 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 MRPL2Q5T653 305 aaKnown RBP18.52■□□□□ 0.56
NEDD8-201ENST00000250495 PAQR6Q6TCH4 344 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 CASP12Q6UXS9 341 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 ANKRD42Q8N9B4 389 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 DHRS9Q9BPW9 319 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 RHNO1Q9BSD3 238 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 ADAM19Q9H013 955 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 WDR55Q9H6Y2 383 aaPredicted RBP18.52■□□□□ 0.56
NEDD8-201ENST00000250495 GDF2Q9UK05 429 aaPredicted RBP18.52■□□□□ 0.56
NEDD8-201ENST00000250495 FLVCR1Q9Y5Y0 555 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 PLCE1Q9P212 2302 aa18.52■□□□□ 0.56
NEDD8-201ENST00000250495 E7EQL1 145 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 ITGA5P08648 1049 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 CXCR1P25024 350 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 SLC17A1Q14916 467 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 C1QTNF12Q5T7M4 302 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 FBXL14Q8N1E6 418 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 OR52E4Q8NGH9 312 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 PNPT1Q8TCS8 783 aaKnown RBP18.51■□□□□ 0.55
NEDD8-201ENST00000250495 CBLN4Q9NTU7 201 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 CALML5Q9NZT1 146 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 DCTN4Q9UJW0 460 aa18.51■□□□□ 0.55
NEDD8-201ENST00000250495 CHD3Q12873 2000 aaKnown RBP18.5■□□□□ 0.55
NEDD8-201ENST00000250495 A0A1W2PR80 420 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 M0R1B8 84 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 PDLIM1O00151 329 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 SSX4O60224 188 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 SNNO75324 88 aaPredicted RBP18.5■□□□□ 0.55
NEDD8-201ENST00000250495 SLC22A3O75751 556 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 GPIP06744 558 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 IDO1P14902 403 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 PTNP21246 168 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 FOXG1P55316 489 aaPredicted RBP18.5■□□□□ 0.55
NEDD8-201ENST00000250495 WDR4P57081 412 aaKnown RBP18.5■□□□□ 0.55
NEDD8-201ENST00000250495 ZSWIM7Q19AV6 140 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 ATG16L1Q676U5 607 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 NXNQ6DKJ4 435 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 MUC15Q8N387 334 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 C17orf78Q8N4C9 275 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 C1orf162Q8NEQ5 155 aaPredicted RBP18.5■□□□□ 0.55
NEDD8-201ENST00000250495 OR52P1PQ8NH57 321 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 ZBTB9Q96C00 473 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 MDFIQ99750 246 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 SF3B5Q9BWJ5 86 aaKnown RBP18.5■□□□□ 0.55
NEDD8-201ENST00000250495 AMBRA1Q9C0C7 1298 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 PIF1Q9H611 641 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 P2RX2Q9UBL9 471 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 ADAM21Q9UKJ8 722 aa18.5■□□□□ 0.55
NEDD8-201ENST00000250495 CR1P17927 2039 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 ZC3H12DA2A288 527 aaKnown RBP18.49■□□□□ 0.55
NEDD8-201ENST00000250495 TLX2O43763 284 aaPredicted RBP18.49■□□□□ 0.55
NEDD8-201ENST00000250495 KITP10721 976 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 FABP6P51161 128 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 COPZ1P61923 177 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 CEACAM7Q14002 265 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 LIN52Q52LA3 116 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 PDCD4Q53EL6 469 aaKnown RBP18.49■□□□□ 0.55
NEDD8-201ENST00000250495 OTUD3Q5T2D3 398 aaPredicted RBP18.49■□□□□ 0.55
NEDD8-201ENST00000250495 TSPO2Q5TGU0 170 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 WDR31Q8NA23 367 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 TMEM45BQ96B21 275 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 C1QTNF6Q9BXI9 259 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 CACNG6Q9BXT2 260 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 SLC7A10Q9NS82 523 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 RLIMQ9NVW2 624 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 ZNF232Q9UNY5 417 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 AMDHD2Q9Y303 409 aa18.49■□□□□ 0.55
NEDD8-201ENST00000250495 SONP18583 2426 aaKnown RBP18.49■□□□□ 0.55
NEDD8-201ENST00000250495 TMEM120BA0PK00 339 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 CDHR4A6H8M9 788 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 POLR3GO15318 223 aaPredicted RBP18.48■□□□□ 0.55
NEDD8-201ENST00000250495 CD5LO43866 347 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 ANP32DO95626 131 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 ZCCHC18P0CG32 403 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 BMP4P12644 408 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 CRATP43155 626 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 NUDT6P53370 316 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 CRISP3P54108 245 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 DSCR9P59020 149 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 RAB35Q15286 201 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 MAPK11Q15759 364 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 C9orf135Q5VTT2 229 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 WBP2NLQ6ICG8 309 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 C11orf71Q6IPW1 123 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 ZNF544Q6NX49 715 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 TMEM99Q8N816 258 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 RMND5AQ9H871 391 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms