RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 FOXN4Q96NZ1 517 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 SSX3Q99909 188 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 NDC1Q9BTX1 674 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 TRPV4Q9HBA0 871 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 PRR13Q9NZ81 148 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 CA5BQ9Y2D0 317 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 SLC27A6Q9Y2P4 619 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 GPR55Q9Y2T6 319 aaPredicted RBP13.9□□□□□ -0.18
HOXC12-201ENST00000243103 ZNF879B4DU55 563 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 PPP2R1BP30154 601 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 SKP1P63208 163 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 SSX2Q16385 188 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 TMEM201Q5SNT2 666 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 RNLSQ5VYX0 342 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 CCDC116Q8IYX3 515 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 GAL3ST3Q96A11 431 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 ZNF629Q9UEG4 869 aaPredicted RBP13.9□□□□□ -0.18
HOXC12-201ENST00000243103 ING1Q9UK53 422 aaPredicted RBP13.9□□□□□ -0.18
HOXC12-201ENST00000243103 TRBV2A0A0J9YWF9 115 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 A0A1W2PS29 197 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 UBL3O95164 117 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 SERPINA5P05154 406 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 SDHAP31040 664 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 ZNF124Q15973 351 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 CERS6Q6ZMG9 384 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 TMPRSS12Q86WS5 348 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 CD300LFQ8TDQ1 290 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 RFKQ969G6 155 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 ZNF350Q9GZX5 532 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 EXOSC3Q9NQT5 275 aaKnown RBP13.9□□□□□ -0.18
HOXC12-201ENST00000243103 LHX3Q9UBR4 397 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 OPN4Q9UHM6 478 aa13.9□□□□□ -0.18
HOXC12-201ENST00000243103 E9PQ18 207 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 MAT2AP31153 395 aaKnown RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 CD80P33681 288 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 EIF2B1Q14232 305 aaKnown RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 COL19A1Q14993 1142 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 ZNF528Q3MIS6 628 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 MED27Q6P2C8 311 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 MRPL10Q7Z7H8 261 aaKnown RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 SFTPA1Q8IWL2 248 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 INTS12Q96CB8 462 aaKnown RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 BBS4Q96RK4 519 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 SOSTQ9BQB4 213 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 ZNF251Q9BRH9 671 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 CHST8Q9H2A9 424 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 PDCD11Q14690 1871 aaKnown RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 A0A1B0GTH9 108 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 A0A1W2PQ45 241 aaPredicted RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 A0A1W2PQY0 241 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 EFCAB7A8K855 629 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 METTL12A8MUP2 240 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 SC5DO75845 299 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 HIST1H2ABP04908 130 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 ARAFP10398 606 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 DLX5P56178 289 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 PITPNAQ00169 270 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 Q3ZCU0 254 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 CLEC9AQ6UXN8 241 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 RNF44Q7L0R7 432 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 HIST3H2AQ7L7L0 130 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 RD3Q7Z3Z2 195 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 HIST1H2ACQ93077 130 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 AHCYL2Q96HN2 611 aaKnown RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 TSPAN10Q9H1Z9 355 aaPredicted RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 KCNE3Q9Y6H6 103 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 TMEM129A0AVI4 362 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 H3BNC9 293 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 K7ESM1 405 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 GPR37L1O60883 481 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 BMP7P18075 431 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 NME2P22392 152 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 FGF9P31371 208 aaPredicted RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 MESP2Q0VG99 397 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 MINDY4Q4G0A6 757 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 ZNF627Q7L945 461 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 DPPA2Q7Z7J5 298 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 STX12Q86Y82 276 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 FAM24BQ8N5W8 94 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 FAM98AQ8NCA5 519 aaKnown RBP13.89□□□□□ -0.19
HOXC12-201ENST00000243103 SMIM3Q9BZL3 60 aa13.89□□□□□ -0.19
HOXC12-201ENST00000243103 IGLV3-10A0A075B6K4 115 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 A0A087WV62 115 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 TMEM218A2RU14 115 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 SULT1B1O43704 296 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 ACTL6AO96019 429 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 HPP00738 406 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 RAB6AP20340 208 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 PSMB5P28074 263 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 SERPINA4P29622 427 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 IRS1P35568 1242 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 CCNJQ5T5M9 372 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 FAM180AQ6UWF9 173 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 LINC00471Q8N535 108 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 ARIH2OSQ8N7S6 290 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 STOML3Q8TAV4 291 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 FUBP3Q96I24 572 aaKnown RBP eCLIP13.88□□□□□ -0.19
HOXC12-201ENST00000243103 ULBP3Q9BZM4 244 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 OR2AG1Q9H205 316 aa13.88□□□□□ -0.19
HOXC12-201ENST00000243103 NOX4Q9NPH5 578 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms