RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 PPT1P50897 306 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 SPCS3P61009 180 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 SRSF11Q05519 484 aaKnown RBP18.34■□□□□ 0.53
HOXC13-201ENST00000243056 DYRK1AQ13627 763 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 SCARB2Q14108 478 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 TMEM44Q2T9K0 475 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 ACSM5Q6NUN0 579 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 NOXRED1Q6NXP6 359 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 DCUN1D3Q8IWE4 304 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 NRSN1Q8IZ57 195 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 SLC43A2Q8N370 569 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 DEFB119Q8N690 84 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 OR1S2Q8NGQ3 325 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 HAVCR2Q8TDQ0 301 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 C19orf43Q9BQ61 176 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 KCND3Q9UK17 655 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 EXOSC1Q9Y3B2 195 aaKnown RBP18.34■□□□□ 0.53
HOXC13-201ENST00000243056 TRBC2A0A5B9 178 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 LRRN3E7EW58 273 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 GFYI3L273 518 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 UBL3O95164 117 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 AMD1P17707 334 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 AOAHP28039 575 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 TRHRP34981 398 aaPredicted RBP18.34■□□□□ 0.53
HOXC13-201ENST00000243056 GDNFP39905 211 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 TAS2R60P59551 318 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 SLC3A1Q07837 685 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 CHAF1BQ13112 559 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 FAM27D1Q5T7N8 215 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 ZNF626Q68DY1 528 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 CYB5R2Q6BCY4 276 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 ALKBH2Q6NS38 261 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 OR52B4Q8NGK2 314 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 CMTM7Q96FZ5 175 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 NRTNQ99748 197 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 SLC17A9Q9BYT1 436 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 LRRN3Q9H3W5 708 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 METTL1Q9UBP6 276 aaKnown RBP18.34■□□□□ 0.53
HOXC13-201ENST00000243056 CYP8B1Q9UNU6 501 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 RCE1Q9Y256 329 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 ZDBF2Q9HCK1 2354 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 LOC390937A0A1W2PQ73 354 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 C9orf170A2RU37 121 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 ZNF35P13682 527 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 CCR9P51686 369 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 BLOC1S1P78537 153 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 LRRC74AQ0VAA2 488 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 SSX2Q16385 188 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 SLC25A35Q3KQZ1 300 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 CFAP206Q8IYR0 622 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 FBXO15Q8NCQ5 510 aaPredicted RBP18.33■□□□□ 0.53
HOXC13-201ENST00000243056 HRASLSQ9HDD0 168 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 MRPS18AQ9NVS2 196 aaKnown RBP18.33■□□□□ 0.53
HOXC13-201ENST00000243056 PCDHB10Q9UN67 800 aa18.33■□□□□ 0.53
HOXC13-201ENST00000243056 CARHSP1Q9Y2V2 147 aaKnown RBP18.33■□□□□ 0.53
HOXC13-201ENST00000243056 TTC28Q96AY4 2481 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 C5orf58C9J3I9 102 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 DCNP07585 359 aaKnown RBP18.33■□□□□ 0.52
HOXC13-201ENST00000243056 EPORP19235 508 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 SGCGQ13326 291 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 C10orf91Q5T1B1 145 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 ARRDC1Q8N5I2 433 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 OR8J2Q8NGG1 315 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 AKR7LQ8NHP1 331 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 THEM6Q8WUY1 208 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 PMM1Q92871 262 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 KCTD12Q96CX2 325 aaKnown RBP18.33■□□□□ 0.52
HOXC13-201ENST00000243056 MEGF10Q96KG7 1140 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 GINS4Q9BRT9 223 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 FAM117AQ9C073 453 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 MFFQ9GZY8 342 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 ASB6Q9NWX5 421 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 SLC23A2Q9UGH3 650 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 SLCO1B1Q9Y6L6 691 aa18.33■□□□□ 0.52
HOXC13-201ENST00000243056 A0A0G2JK05 382 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 PHYHO14832 338 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 OR2T1O43869 369 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 CREBL2O60519 120 aaPredicted RBP18.32■□□□□ 0.52
HOXC13-201ENST00000243056 STX11O75558 287 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 CLDN9O95484 217 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 HOXC4P09017 264 aaPredicted RBP18.32■□□□□ 0.52
HOXC13-201ENST00000243056 UBBP0CG47 229 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 UBCP0CG48 685 aaKnown RBP18.32■□□□□ 0.52
HOXC13-201ENST00000243056 ELAVL4P26378 380 aaKnown RBP18.32■□□□□ 0.52
HOXC13-201ENST00000243056 RPS27AP62979 156 aaKnown RBP18.32■□□□□ 0.52
HOXC13-201ENST00000243056 UBA52P62987 128 aaKnown RBP18.32■□□□□ 0.52
HOXC13-201ENST00000243056 SLC25A30Q5SVS4 291 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 PGBD2Q6P3X8 592 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 SLC9B2Q86UD5 537 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 IZUMO1Q8IYV9 350 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 FAM98AQ8NCA5 519 aaKnown RBP18.32■□□□□ 0.52
HOXC13-201ENST00000243056 CA5BP1Q8WTZ4 195 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 SLC38A1Q9H2H9 487 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 PTGFRNQ9P2B2 879 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 ZNF629Q9UEG4 869 aaPredicted RBP18.32■□□□□ 0.52
HOXC13-201ENST00000243056 GPR52Q9Y2T5 361 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 OR6C76A6NM76 312 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 RGS9O75916 674 aaPredicted RBP18.32■□□□□ 0.52
HOXC13-201ENST00000243056 OR8U8P0C7N1 319 aa18.32■□□□□ 0.52
HOXC13-201ENST00000243056 COX5BP10606 129 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms