RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 LCTLQ6UWM7 567 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 BEST4Q8NFU0 473 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 NDUFB2O95178 105 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 CPT2P23786 658 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 CD1CP29017 333 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 ADIPOR2Q86V24 386 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 SUMF1Q8NBK3 374 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 TNFRSF19Q9NS68 423 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 WDR4P57081 412 aaKnown RBP12.36□□□□□ -0.43
NEK9-201ENST00000238616 TNK1Q13470 666 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 OR8G2PQ6IF36 304 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 TERB2Q8NHR7 220 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 SHARPINQ9H0F6 387 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 LANCL2Q9NS86 450 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 OR6C65A6NJZ3 312 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 BMPR1AP36894 532 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 SSR4P51571 173 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 PEA15Q15121 130 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 IRF4Q15306 451 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 ALKBH6Q3KRA9 238 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 GDPD3Q7L5L3 318 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 DNAJC22Q8N4W6 341 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 TTC9BQ8N6N2 239 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 GOLT1BQ9Y3E0 138 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 ZNF587BE7ETH6 402 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 C17orf112F2Z3M2 114 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 OR7A17O14581 309 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 PVRP15151 417 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 CARD18P57730 90 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 TMEM31Q5JXX7 168 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 NTPCRQ9BSD7 190 aaKnown RBP12.36□□□□□ -0.43
NEK9-201ENST00000238616 SLC2A11Q9BYW1 496 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 OSGIN2Q9Y236 505 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 C4orf47A7E2U8 309 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 ARHGAP11BQ3KRB8 267 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 IMP4Q96G21 291 aaKnown RBP12.36□□□□□ -0.43
NEK9-201ENST00000238616 TPOP07202 933 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 MAKP20794 623 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 PRDX3P30048 256 aaKnown RBP12.36□□□□□ -0.43
NEK9-201ENST00000238616 SLC1A3P43003 542 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 SPATS1Q496A3 300 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 SLC22A25Q6T423 547 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 NLRP8Q86W28 1048 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 ZFP90Q8TF47 636 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 ASB11Q8WXH4 323 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 SELENOIQ9C0D9 397 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 PATZ1Q9HBE1 687 aaKnown RBP12.36□□□□□ -0.43
NEK9-201ENST00000238616 DCAF16Q9NXF7 216 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 SHPRHQ149N8 1683 aa12.36□□□□□ -0.43
NEK9-201ENST00000238616 FUOMA2VDF0 154 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 TMX2-CTNND1H3BSU7 103 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 IL3RAP26951 378 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 RPL7L1Q6DKI1 246 aaKnown RBP12.35□□□□□ -0.43
NEK9-201ENST00000238616 ZNF705AQ6ZN79 300 aaPredicted RBP12.35□□□□□ -0.43
NEK9-201ENST00000238616 KCNJ15Q99712 375 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 ATF6BQ99941 703 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 EBF1Q9UH73 591 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 SLC45A1Q9Y2W3 748 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 DCCP43146 1447 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 HADHBP55084 474 aaKnown RBP12.35□□□□□ -0.43
NEK9-201ENST00000238616 NAGSQ8N159 534 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 TCTN2Q96GX1 697 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 SEMA4CQ9C0C4 833 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 SLC43A1O75387 559 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 SNHG28P0DPA3 235 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 IL4RP24394 825 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 CD38P28907 300 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 ATP1B3P54709 279 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 ARL6IP1Q15041 203 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 GOT1L1Q8NHS2 421 aaPredicted RBP12.35□□□□□ -0.43
NEK9-201ENST00000238616 CLCF1Q9UBD9 225 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 CD300AQ9UGN4 299 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 E7ESA3 106 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 GABREP78334 506 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 GPR18Q14330 331 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 SLC36A2Q495M3 483 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 ZADH2Q8N4Q0 377 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 ZNF454Q8N9F8 522 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 ZFAND1Q8TCF1 268 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 PRRT1Q99946 306 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 MFRPQ9BY79 579 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 CNTNAP3Q9BZ76 1288 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 ARHGAP39Q9C0H5 1083 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 K7EQM0 130 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 XRCC3O43542 346 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 OR7E24Q6IFN5 339 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 CCBE1Q6UXH8 406 aaPredicted RBP12.35□□□□□ -0.43
NEK9-201ENST00000238616 GPRIN1Q7Z2K8 1008 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 TFAP2CQ92754 450 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 KRBA1A5PL33 1030 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 ZNF732B4DXR9 585 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 SIGLEC6O43699 453 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 PRKYO43930 277 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 MPC1LP0DKB6 136 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 RPL13AP40429 203 aaKnown RBP12.35□□□□□ -0.43
NEK9-201ENST00000238616 POU4F3Q15319 338 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 TECRLQ5HYJ1 363 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 MTMR14Q8NCE2 650 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms