RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 BCL2L10Q9HD36 194 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 NPHS2Q9NP85 383 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 NGBQ9NPG2 151 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 RNF115Q9Y4L5 304 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 AKAP6Q13023 2319 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 CIB4A0PJX0 185 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 LIPT2A6NK58 231 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 GPIP06744 558 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 MAP2K6P52564 334 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 SLC16A1P53985 500 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 FOXG1P55316 489 aaPredicted RBP12.55□□□□□ -0.4
GPN3-201ENST00000228827 CDK6Q00534 326 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 BSPH1Q075Z2 132 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 FAPQ12884 760 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 ZSWIM7Q19AV6 140 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 C9orf135Q5VTT2 229 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 PRAMEF8Q5VWM4 474 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 PRAMEF7Q5VXH5 474 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 PAQR6Q6TCH4 344 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 SEZ6L2Q6UXD5 910 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 LRRC75A-AS1Q8N1F1 130 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 OR52E4Q8NGH9 312 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 OR52N5Q8NH56 324 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 LILRB1Q8NHL6 650 aaPredicted RBP12.55□□□□□ -0.4
GPN3-201ENST00000228827 C3orf49Q96BT1 292 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 MUCL1Q96DR8 90 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 TAPBPLQ9BX59 468 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 RSPO3Q9BXY4 272 aaPredicted RBP12.55□□□□□ -0.4
GPN3-201ENST00000228827 IKZF5Q9H5V7 419 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 ADPRHL2Q9NX46 363 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 FLVCR1Q9Y5Y0 555 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 VPS13CQ709C8 3753 aa12.55□□□□□ -0.4
GPN3-201ENST00000228827 A0A0G2JND7 137 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 A0A1W2PP18 115 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 A0A1W2PR80 420 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 DPRXA6NFQ7 191 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 A8MVM7 634 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 EDF1O60869 148 aaKnown RBP12.54□□□□□ -0.4
GPN3-201ENST00000228827 CNOT4O95628 575 aaKnown RBP12.54□□□□□ -0.4
GPN3-201ENST00000228827 PPIBP23284 216 aaKnown RBP12.54□□□□□ -0.4
GPN3-201ENST00000228827 AQP1P29972 269 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 SLC17A1Q14916 467 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 GLIPR1L2Q4G1C9 344 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 C1orf140Q5VVS0 124 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 ADAM5Q6NVV9 412 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 YTHDF3Q7Z739 585 aaKnown RBP12.54□□□□□ -0.4
GPN3-201ENST00000228827 GPAT4Q86UL3 456 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 COMTD1Q86VU5 262 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 ZNF611Q8N823 705 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 KBTBD8Q8NFY9 601 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 TMEM171Q8WVE6 324 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 Q96MF0 132 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 SMR3AQ99954 134 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
GPN3-201ENST00000228827 ASB6Q9NWX5 421 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 NPAP1Q9NZP6 1156 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 UPB1Q9UBR1 384 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 RPS6KB2Q9UBS0 482 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 LAMP3Q9UQV4 416 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 SLC9A8Q9Y2E8 581 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 HEATR5AQ86XA9 2040 aa12.54□□□□□ -0.4
GPN3-201ENST00000228827 TRBV5-3A0A0A0MS03 114 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 OR5H1A6NKK0 313 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 EVPLLA8MZ36 301 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 TPST1O60507 370 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 ETS2P15036 469 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 PTH2RP49190 550 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 IRX1P78414 480 aaPredicted RBP12.53□□□□□ -0.4
GPN3-201ENST00000228827 SCARB2Q14108 478 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 TIMM23BQ5SRD1 257 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 TSPO2Q5TGU0 170 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 REEP3Q6NUK4 255 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 DLEU7Q6UYE1 221 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 DHDDSQ86SQ9 333 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 KRT73Q86Y46 540 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 OR9K2Q8NGE7 335 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 C18orf12Q96KH6 178 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 ZNF385AQ96PM9 386 aaKnown RBP12.53□□□□□ -0.4
GPN3-201ENST00000228827 CPPED1Q9BRF8 314 aaPredicted RBP12.53□□□□□ -0.4
GPN3-201ENST00000228827 PRR14Q9BWN1 585 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 RABEP2Q9H5N1 569 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 CXorf56Q9H5V9 222 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 SLC7A10Q9NS82 523 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 TMEM45AQ9NWC5 275 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 PARPBPQ9NWS1 579 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 TAS2R16Q9NYV7 291 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 MALT1Q9UDY8 824 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 LEF1Q9UJU2 399 aaPredicted RBP12.53□□□□□ -0.4
GPN3-201ENST00000228827 NDUFAF1Q9Y375 327 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 MAP1AP78559 2803 aaPredicted RBP12.53□□□□□ -0.4
GPN3-201ENST00000228827 ZNF469Q96JG9 3925 aaPredicted RBP12.53□□□□□ -0.4
GPN3-201ENST00000228827 AQP7P3A6NL99 342 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 ELOA3DA6NLF2 546 aaPredicted RBP12.53□□□□□ -0.4
GPN3-201ENST00000228827 TMEM229AB2RXF0 380 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 ANGPT2O15123 496 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 ITGA5P08648 1049 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 FOSL1P15407 271 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 SLC6A2P23975 617 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 PRKAR1BP31321 381 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms